Vibrio alfacsensis: D1115_02095 Help Entry D1115_02095       CDS       T05841                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism vaf  Vibrio alfacsensis Pathway vaf02020   Two-component system vaf02040   Flagellar assembly vaf05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vaf00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     D1115_02095  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     D1115_02095   09142 Cell motility    02040 Flagellar assembly     D1115_02095  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vaf03021]     D1115_02095 Transcription machinery [BR:vaf03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      D1115_02095 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 IPPT TetR_C_5-like Motif Other DBs NCBI-ProteinID:  AXY00217 UniProt:  A0ABM6YRB9 LinkDB All DBs Position I:complement(416906..418372) Genome browser AA seq 488 aa AA seqDB search MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVEEGHEEAQVNG EDKSASEAADNSANDASEPDLPDSSDVIEKSEISSELEIDTTWDDVYSANTGSTGIALDD DMPVYQGETTESLHDYLMWQLDLTPFSENDRTIAIAIIDAVDDYGYLTLTPEEIHESFDN EDIELDEVEAVRKRIQQFDPLGVASRNLQECLLLQLVTFPEDTPWLAEARMVLRDHIDHL GNRDYKLVLKETKLKEADLREVLKLIQQLDPRPGSRITPDDTEYVIPDVSVFKDHGKWTV SINPDSIPKLKVNQQYAQLGKGNSADSQYIRSNLQEAKWLIKSLESRNETLLKVARCIVE HQQDFFDYGEEAMKPMVLNDVALDVDMHESTISRVTTQKFMHTPRGIFELKYFFSSHVST DNGGECSSTAIRALIKKLVAAENTAKPLSDSKIADLLADQGIQVARRTIAKYRESLGIAP SSQRKRLL NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt atgaaaccttcattacaactcaagctaggtcaacagttagccatgacgccgcaactgcaa caggcaattcgcctgttacaattgtcgacgctagaccttcaacaagagatccaagaagca ttagattccaacccgcttttggaagttgaagaaggccacgaagaagctcaagtcaacggt gaagataagtcagcttcagaagccgctgacaacagtgcaaacgacgcctcggaacccgac cttcccgatagctcagatgttattgaaaagtcagaaattagctctgagttagaaatcgat accacttgggatgacgtgtatagcgccaatacaggtagcactggaatagcactcgatgac gatatgccagtgtaccaaggtgaaaccactgagtcgctgcacgactacctaatgtggcaa ttggatttaacaccgtttagcgaaaacgaccgaaccatcgcaatcgcgatcattgatgcg gttgacgattatggctatttgacgctcactcctgaagaaatccatgaaagcttcgacaac gaagacattgaattggatgaagtcgaagcagttcgcaaacgcatccaacaatttgaccct ctcggtgtggcctctcgtaacctgcaagagtgtttgctactgcaattagtgactttccca gaagataccccatggcttgcagaggcaagaatggtgctgagagaccatatcgatcatctg ggaaatcgtgactacaagttggtgctcaaagaaaccaaattaaaagaagccgacttacgc gaagtattgaagctcatccagcaacttgatcctcgaccgggcagtcgcattactcctgat gatactgaatacgtcatccctgatgtttctgtatttaaagaccatggtaaatggaccgta tccattaaccctgacagcattccaaaactcaaagtaaatcaacaatatgcccaacttgga aaaggcaacagtgcggatagccagtacatccgtagcaatttgcaagaggcaaaatggtta attaagagcctagaaagcagaaacgagacccttctcaaagttgcaagatgtattgttgaa catcaacaagatttcttcgactatggtgaagaagccatgaagccaatggtcctcaatgac gtagcattggatgtggatatgcatgaatcaacgatctctcgtgtgacaacgcagaaattc atgcacacaccgcgtggcatttttgaattgaagtacttcttctctagtcatgtcagtaca gacaatggtggagaatgttcgtccacagcaatccgcgcactcattaaaaaactggttgct gctgaaaatacagcgaaaccattgagtgacagtaagattgctgatcttctggctgaccaa gggattcaggtcgcaaggcgaaccattgcgaaatatcgcgagtccttgggtatcgcccca tcaagtcagcgtaaacgcctactttaa

DBGET integrated database retrieval system