Vibrio alfacsensis: D1115_02230
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Entry
D1115_02230 CDS
T05841
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D1115_02230 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_02230 (lptF)
Transporters [BR:
vaf02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
D1115_02230 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
AXY00243
UniProt:
A0ABM6YRE5
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All DBs
Position
I:441193..442293
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AA seq
366 aa
AA seq
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MIIVRYLIRETLKSQFAIFFVLFLVFVSQKFISVLADASDGDIPAGLIFSVVGLNMPAMG
LLMLPLSLYIGILITFGRLYAESEIVVMNATGIGNKFLVHAALYLALITSAVAAFNALWL
SPWSQDRVEQLYEQVAAENSVDLLKKGQFQGTPDGSSVVFIDDIKNSTLSNVFVAQMRPR
DSILPSVMFSSSGEVKELSDGRQIITMHDGTRYEGVPTRVEYMVTKFDQYEGVIGQREVK
EKGRDWEAYPTVDLIGHPDPEAQAELQWRISLFVCIPLLTMLVIPLSAVNPRQGRFAKMG
PAILIYLAYFLAISATKSALEDGAIPAAIGMWPINAMLLIVAILANMMDSVPARRMKDKF
RKKRLA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgattattgttagatatttgatccgcgaaacactcaagagccaatttgcgattttcttc
gtgctttttttggtgtttgtgagccagaagttcatcagcgtacttgctgatgcttctgat
ggggatattccagccggtttgattttctctgttgtaggtctaaatatgcctgcgatgggg
cttttgatgctgccattaagtttgtacatcggcatattgattaccttcgggcgtctgtat
gcagagagcgagatcgtggttatgaacgcgacaggtatcgggaataagttcttggtacat
gcggcgttgtatttagcattgattacctctgctgttgcggctttcaatgctttatggtta
tcgccttggtctcaagatcgcgttgaacaactgtatgaacaggtggctgcggaaaacagc
gttgatcttttgaagaaagggcaattccaaggtacgccagatggatcttcggttgtcttt
attgatgacataaaaaatagcacgctcagtaatgtgtttgttgcgcagatgcgtccacgt
gactctatcttgcctagtgtgatgttttcttcttctggtgaagtaaaagaactatccgat
ggacgtcagatcatcaccatgcatgatgggacgcgttatgaaggtgtgcctactcgcgtt
gaatatatggtgactaagtttgatcaatacgaaggtgtgattggtcaacgagaggtgaag
gaaaaaggtcgtgattgggaagcttacccaacggtggatttaatcgggcatcctgatccg
gaagctcaggccgaactgcaatggcgtatttctttatttgtctgtattccattgttgacg
atgctcgtcattccactttctgcagtgaatccgcgtcagggacgcttcgctaagatgggg
ccagcgattttgatttacttagcctatttcctagcaatcagtgcgacgaaatcggcactg
gaagatggagcgatccctgctgcaattggtatgtggccgatcaatgctatgttgctcatt
gtcgctattttggcaaacatgatggacagtgttcctgctcgacgtatgaaagacaaattc
cgtaagaagaggctcgcgtaa
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