Vibrio alfacsensis: D1115_03140
Help
Entry
D1115_03140 CDS
T05841
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00550
Peptidoglycan biosynthesis
vaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D1115_03140 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vaf01003
]
D1115_03140 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaf01011
]
D1115_03140 (mrcB)
Enzymes [BR:
vaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
D1115_03140 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
D1115_03140 (mrcB)
Glycosyltransferases [BR:
vaf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
D1115_03140 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vaf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
D1115_03140 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
VPS3_N
Motif
Other DBs
NCBI-ProteinID:
AXY00375
UniProt:
A0ABM6YS04
LinkDB
All DBs
Position
I:610015..612405
Genome browser
AA seq
796 aa
AA seq
DB search
MTDTKKPSVKKSPAKKATPNKSTTAKSSSAKRPKRSPSKKPSGEKRSWLKTIWSFSWKAG
VALAAVLVFVGIYLDSVVKDRFDGQLFDLPTVVYARILTLSPGENISVKEMRNELDVLNY
RKVSQPRYPGEYSSSSTRIELIRRPFEFADGPEPDRHVMLHFSDSGLQRIQSLESKGDLG
YLRIEPKMLGMLEKDQNEQRLFLRRDQFPEILVDALLATEDRDFYQHDGVSPLAIGRALV
ANIKAGRTVQGGSTLTQQLAKNLFLTRDKTLWRKVREAYIALILDYRYSKDRILEAYLNE
VYLGQSGGDAIHGFGLASRYYFGQPIQELRIDQLAMLVGMVKGPSYYNPIRYPERTKERR
DLVLRLLMQQDMLTAEQYEQAVNRPLDTQSKPRIASRQPAYFQQLNIELKEKVGDNFKSD
TGLRLFTSLDPVSQSKLEKAIAKKVPELAQRAGKELEAAAVAVDRHSGEVRAMVGGKRVG
YEGFNRALNASRPIGSLVKPAIYLTALEQPEKYNLATTLHDTPLSLKGSKGTVWSPRNFD
RKFRGDVPLYLALAKSLNVPTVRLGMQLGIPEVSDTLGRLGVDKQEIRPVPSMFLGAFSL
TPFEVAQMYQTLTNSGKRAKLSALRSVIDMDGNVLYQSLPKSSPAVDEQAAWLTTYAMKQ
GVAQGTGRFLQSQFAWAALAGKTGTSNDSRDSWFVGIDGREVTTIWLGRDDNKSTKLTGS
SGALRVYAEYLQQRIPERLDLPWPREVTTLGFQKTPQGALEMNCRSEYKLPVWDKTGQIK
QQCEKKSNWLNKLFDW
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacaaaaaagcctagcgtgaaaaaatcgccagccaaaaaagcaacgccaaat
aaatcgacaacggcaaaaagcagcagtgcgaaacgaccaaagcgatcaccatcgaaaaag
ccaagcggtgagaaacgctcttggctgaaaactatctggtcattcagttggaaagctggc
gtagcgctggctgcagtattggtatttgtcggtatttatttagatagtgtggtgaaagat
cgctttgatggtcagctttttgatcttccaactgtcgtctatgcccgtattttaacgttg
agtccaggagaaaacatttccgttaaagaaatgcgcaatgaattggacgtgttgaattat
cgtaaggtgagtcaacctcgttatcccggggagtattcttcttcttcaactcgcatagag
ttgatccgtcgtccgtttgagtttgcagatggaccagagccagatcgtcacgttatgctg
catttctctgatagtggtttgcaacggattcaatctttggagtcgaaaggggatctcggt
tacttgcgtatcgaacctaagatgttgggtatgctggaaaaagatcaaaatgaacagcgt
ttattcttacgtcgcgatcaatttccggagattttggtcgatgcgttattagcaacggaa
gaccgtgatttttaccaacatgatggcgtgtcaccactggctattggtcgtgcgcttgtg
gccaatattaaagcggggcgcaccgttcaaggtggtagtactctgactcagcagttagcc
aaaaacctgtttcttactcgtgacaaaaccttatggcgcaaagtgcgtgaagcgtatatt
gcgttaatcttagattatcgctacagcaaagaccgaattcttgaagcgtacctaaatgaa
gtctatttaggccaaagtggtggtgatgcgattcatggctttggcttggcatcgcgttac
tactttggtcaaccgattcaagagctgcgtattgatcaattagcgatgctggtgggcatg
gtcaaaggcccatcttactacaatccaattcgttatcctgaacgcaccaaagaacgacgt
gacttggttctgcgtttgcttatgcaacaagatatgttaaccgcagagcaatatgaacaa
gcggtgaatcgtccattggatacgcaaagtaagccgcgtattgccagtcgtcagccagct
tacttccaacagctaaacattgaactgaaagagaaagtgggtgataactttaagtcggat
actggtttacgattgtttacctcgttggatccggtttcacaaagtaagttggaaaaagcc
attgcgaagaaagtccctgagcttgcgcaacgagcgggtaaagaattagaagcggctgcg
gttgcggttgatcgtcatagcggcgaagttcgagcaatggtcggaggtaagcgagtcggg
tatgagggcttcaaccgagcattgaatgcaagtcgtccgataggctctctggtcaagccg
gctatctatttaacggcgttagaacaaccagaaaagtacaacttagcgacaacattgcac
gatacaccattgagtttaaaaggcagcaaggggacggtttggtcgcctcgaaactttgat
cgtaaattccgtggcgatgtgcctttgtacttagcactggcaaagtcattgaacgtacca
acggttcgattgggtatgcaacttggtattcctgaagtctccgatacgttgggacggttg
ggcgtcgataagcaagagattcgccctgttccatcgatgttccttggcgcattctcgtta
acgccgtttgaagttgcacagatgtaccagacgctgaccaattcagggaaacgagcgaaa
ttatcagcattgcgttctgtaatcgatatggacggcaatgtactataccaatcattacct
aaatcctcgccagcggtcgatgagcaagcggcttggctaacgacttatgcgatgaagcaa
ggtgttgcacaaggaacaggacgcttcttacaaagtcagttcgcatgggccgcattagca
gggaaaacgggtaccagtaatgatagccgggatagttggtttgtcggaattgatggccga
gaagtaacgacaatttggcttggccgagatgataataaatcgacgaaattgacgggttct
agcggtgctttacgtgtttatgcggaatacttgcagcaacgtatacctgagcggttggat
ttaccttggcctagagaggtcactacattgggctttcaaaagacccctcaaggtgcatta
gaaatgaattgtcgtagtgagtataagctgccagtttgggataaaacgggccaaatcaaa
caacaatgtgagaaaaagtctaattggttgaacaagttatttgattggtaa
DBGET
integrated database retrieval system
