Vibrio alfacsensis: D1115_03495
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Entry
D1115_03495 CDS
T05841
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_03495 (radA)
DNA repair and recombination proteins [BR:
vaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D1115_03495 (radA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA
ABC_tran
AAA_22
RecA_N
AAA_14
AAA_16
nSTAND_NTPase5
NTPase_1
AAA_24
Zeta_toxin
AAA_29
Viral_helicase1
Zn_ribbon_8
Zn_ribbon_Thio2
AAA_5
nSTAND3
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AXY00430
UniProt:
A0ABM6YS13
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All DBs
Position
I:702326..703705
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRIAASPTVARNERLSGYAGSATES
KVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGSPGAGKSTLLLQTMCLLSS
QMPTLYVTGEESLQQVAMRASRLGLPKDHLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcaaaacgagcgtatgtttgtaatgattgtggcgcagacttcccacgttgg
cagggacaatgtaatgcgtgtggcgcttggaacacgataactgaagttcgaattgcagcg
tctccaactgttgcccgcaatgagcgcttaagtggctatgcaggttcagcaaccgaatca
aaagtgcaaacgctgtcagagattgacttgcaagaagtgcctaggtttacaagtggtttt
aaagagttagatcgagttcttggtggcggcgtcgttccaggcgcggctattttgattggt
ggtagtcctggtgcaggtaagtcgaccttattactgcaaacgatgtgtttattatcgtca
cagatgccaacgttatatgtcacgggtgaggaatcactccagcaagttgcgatgcgagct
tctcgtttgggtttaccaaaagaccatctaaagatgctgtcagaaaccaatgtcgataaa
atttgtcagatagcagagaaagaacaaccacgcatcatggtcatcgactcgattcaggtt
atgcatgtttctgacgttcagtcctctccggggagtgtcgcacaggtccgtgagtccgca
accgctttgacgcgttacgcaaagcagaataatgttgccgtgtttattgttggtcacgta
acaaaagatggtacgttggcgggtcctaaagtacttgaacacatcattgactgctccgtt
ttattagatggtggaacagacagtcgattccgaacgctacgcagccacaaaaaccgcttt
ggtgcggtaaatgagttgggtgtatttgcaatgacagggcagggcttaaaagaagtcagt
aacccatcggcgatcttcctttctcgaggagaagaagaaacatcgggttcatctgtcatg
gtcgtttgggaggggactcgtccactattggtcgaaattcaggcgctggtggattattct
caattagcgaaccctcgccgagttgcggtaggtctagaacaaaaccgcctgtcactatta
ttagcggtactgcataagcacggcggtctgcaaatggccgatcaagatgtgtttgtgaat
gtggttggtggcgtaaaagtgaccgagaccagtgcagaccttgcattagttatggcgcta
ttatccagttttcgtgatcgtcctttaccaaaagatgtggtggtctttggtgaagttggc
ctagcgggagagattcgtccggtaccaagtggtcaagaacgtttgaatgaagcttttaag
catggctttaagaaagcgatagttccggcggcgaacatgccaaaaggtggcattccagga
atgcagattcatggcgtgaagaagctctcagaggcgatagaagcgtttgatgagttgtga
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