Vibrio alfacsensis: D1115_04835
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Entry
D1115_04835 CDS
T05841
Name
(GenBank) GGDEF domain-containing protein
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
D1115_04835
Enzymes [BR:
vaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
D1115_04835
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Phosphonate-bd
STAR_dimer
Motif
Other DBs
NCBI-ProteinID:
AXY02319
LinkDB
All DBs
Position
I:983548..985560
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AA seq
670 aa
AA seq
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MVKVVRSLLFLACLLFSLCVKAEVTTLSTYKVATEADDVVTRVLFDAIAKEFSIHIEYVT
YSNFDAILEAVAKGEADFAGNITYTEARAKRFSYSRPTNIEYTYLYAISDVSLRDASVIG
VPHGTIYADLITENYPYITLIAYQGHEEAVALMRARRVDGVVDAINQLKPMLLEGVEATL
LNDHISIKPVSIVSRKGTHIDELEKFSSFIHSEKVQKLLRHEITQYQFELRQTALRESIK
TLPFDLDKPITIKFEPLYPYVVYQPDGSVNGLTADVVLRSCDILALNCQVISKPDESWES
MYQEFIKGDFDVLAPFTISQKRQHFSHFPQPHYSPAAVMVKRLGYKTNVYSHVSQLISER
IGVVKDDFFDQMLTRMLPLKDIHRYPSQTELLDAMLAKEVDYIPMDTAMLNHLLRQSELI
PIEQDNAIGEFYHSQLSIGLVDNERGGLLAPYFSRAISMLDLEKIIATYDLRPDWRTALE
YEIRLATQTQVLFVSVLVVALGITLYLYRQSNTDNLTGLRNRRALQVKYRNGFSKDLTIL
YLDINKFKKINDTYGHQSGDEVLKLIAAKIRRVWDGTGYRIGGDEFILLGYPSDEQLTLA
LKELRKLGAKDGLVGDVSNVTISVGVSRQRERFVSLQKGLHLADADMYNSKMRSKPVNTK
QATACEAVGE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttgtgcgaagtttgttgtttttggcttgcttgttgttcagtttatgcgtt
aaggcagaagtaacaacgctaagtacttataaagtggcgacagaagcagacgatgttgtt
acacgagtattgtttgatgcgattgccaaagaatttagcattcacatcgaatatgttact
tattcaaattttgacgcgattcttgaagcggtcgcaaagggtgaggctgattttgctggc
aatatcacctatacggaggcaagggcaaagcgctttagttactctaggccaaccaatatt
gaatatacctacctttatgctatcagtgacgtctcgttgcgtgatgcttccgttattggc
gttccgcacggcactatctatgcggatcttattacagagaattatccatatatcacgtta
atcgcttatcaaggtcatgaagaagccgtcgcactaatgcgagcgaggcgagtcgatggt
gttgtcgatgcaatcaatcagctaaaaccaatgttgcttgagggggttgaagcgacacta
cttaatgatcatatctccattaaaccggtgtcgattgtcagtcgaaaagggactcacatt
gatgagctagagaagttttcctcatttattcatagtgaaaaagttcaaaagctgttgcga
catgaaattacgcaatatcaatttgaattgcgtcaaacggcattacgagaatcgatcaaa
acactaccttttgatttggataagccgatcacaattaagtttgagccactttacccttat
gttgtttatcaaccagatggctcagttaacggactgaccgcagatgttgtgttgagaagc
tgcgatatattggcgctgaattgtcaggtgatcagtaaacctgacgaaagttgggagtca
atgtaccaagagtttatcaaaggtgattttgacgttcttgctccatttacgattagtcaa
aaacgccaacattttagccacttcccacaacctcattattctcccgcagcggttatggtg
aaaagactggggtataaaaccaacgtgtattcccatgtgtcgcaattgatttctgagcgt
attggtgtcgttaaagacgacttttttgatcagatgctaaccagaatgttaccgcttaaa
gacattcatcgttacccatctcagactgagctcctcgatgccatgctcgcaaaagaggtg
gactatattccgatggatacggcgatgctgaaccatttattgcgccaaagtgagctgatc
ccaatagagcaggacaacgcgataggtgagttttatcattctcaattgtccattggcttg
gtggacaatgaacgaggcggattattagcaccatactttagccgtgcgatttcaatgttg
gatttagaaaaaatcattgcaacgtatgatttacggccagattggcgaaccgcgttggaa
tatgaaattcgtttagccacacagacgcaggtgttgttcgtctccgtgcttgtcgtagca
cttggtatcactttatatctctatcgacagtcaaatacagataacctgacggggttaagg
aaccgacgtgcattgcaagttaagtatcgtaatggcttttctaaagacctgaccatactt
tatttagatatcaataagtttaagaaaatcaatgatacttatggtcatcaatcaggggat
gaagtgctaaaacttatcgctgcaaaaatacgtcgggtatgggatggaacaggttatcgg
attggtggtgatgagtttattctcctcgggtatccatcagacgagcagttaacgttggca
ttgaaagagttacgcaagttgggtgctaaagatggcctcgttggtgatgttagtaatgta
actatctcggttggcgtgtctaggcagcgggagcgttttgttagcttacagaaaggcttg
cacttagcagacgctgatatgtacaacagcaaaatgagatcaaagccagtgaacaccaag
caggcaacagcatgcgaggcggtaggggaataa
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