Vibrio alfacsensis: D1115_04975
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Entry
D1115_04975 CDS
T05841
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D1115_04975 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_04975 (msbA)
Enzymes [BR:
vaf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
D1115_04975 (msbA)
Transporters [BR:
vaf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D1115_04975 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
APS_kinase
RsgA_GTPase
AAA_25
AAA_24
AAA_29
AAA_30
Zeta_toxin
SLFN-g3_helicase
ATPase
G-alpha
DEAD
DUF87
nSTAND3
AAA_15
TniB
MMR_HSR1
AAA_18
ABC_membrane_2
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
AXY00681
LinkDB
All DBs
Position
I:1016892..1018640
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AA seq
582 aa
AA seq
DB search
MSINTDETTWQTFKRLWQFIRLYKSGLIVAVIALVINAISDTYMISLLKPLLDEGFGNAE
SDFLRTLPLIVFGMMFVRGVSGFVSTYCLSWVSGNVVMQVRRMVFNHFMHMPVSYFDKEK
TGNLLSRITYDSEQVSAATSQALVSIVREGASIIGLLVLMFYNSWQLSLVLFAVAPLVAW
GIGVVSKRFRKISRNMQTMMGNVTASAEQMLKGHKVVLSYGGQDIEGKRFEKVSNQMRQQ
SMKLVTAQAAANPIIQMIASIAIVVVLYLASIDSIKDQLTPGTFTVVFSAMFGLMRPLKA
LTNVTSQFQRGMAASQTLFALVDLEPEKNEGKFTVERAKGDVSVKDVTFTYLGAEKPALE
NISFDIPRGKTVALVGRSGSGKSTIANLFNRFYDVNAGSITLDGHDIRDYELKNLREQFA
LVSQNVHLFNDTIANNIAYATEDKYTREDIERAATLAHAMEFIRKMDGGLDAMIGENGAS
LSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKDKTVLVIAHRLS
TIENADEILVVDEGAIVERGSHADLIAKDGAYAQLHRIQFGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaatactgatgaaacgacctggcagacgtttaagcgtctttggcaatttatc
cgcctttataaatccggcctgatcgtcgctgtcattgcattagtgattaatgctatctcc
gatacttatatgatttcgttactaaagccattgcttgatgaaggttttggtaatgcagaa
tctgatttcttgcgcactcttcctttgattgtgtttggcatgatgtttgttcgaggggtg
agtggcttcgtctcgacttactgtttgagttgggtatccggcaatgtggtcatgcaagta
cgccgaatggtgtttaatcactttatgcacatgcccgtgtcttattttgataaagagaaa
accggtaatttgctttcgcgcattacctacgattctgagcaagtatcagcagcaaccagc
caagccttagtgagcattgtgcgtgagggtgcaagcatcattggtttactcgtactgatg
ttttataacagctggcaactgtcattagtgctattcgctgttgcgccgcttgtggcctgg
ggaattggtgttgtttctaagcgttttagaaaaatctctagaaacatgcagaccatgatg
ggcaatgtgacggcatcggcagagcaaatgttgaaaggtcacaaagtcgtattgagttac
ggcggccaagacatcgaaggtaaacgtttcgagaaagtcagtaaccagatgcgtcaacaa
agcatgaagctagtgacggctcaagcggctgctaacccaatcattcaaatgattgcttca
attgccattgtggttgtcctttatttagcaagtatcgactcgattaaagatcagttgacg
ccaggtacgtttaccgtcgtcttttctgcgatgtttggtttgatgcgcccacttaaagct
ctgactaacgtgacctcccagttccaacgtggtatggcggcgagccaaactttatttgcc
cttgtggatcttgaacccgagaaaaatgagggtaaatttaccgttgaacgtgcgaaaggt
gatgtatcggttaaggacgtgacgtttacttatctaggtgcggaaaaaccagcacttgaa
aatatcagttttgatatcccacgaggcaaaacggttgctttggttggacgttctggttct
ggtaagagtacgatagcgaacttattcaaccgcttctacgatgtcaacgccggttctatt
acgcttgacggtcatgacattcgcgattacgagttgaagaatttacgtgagcaatttgcg
ttagtttcgcagaacgttcatttgtttaatgacactattgcaaataacatcgcgtacgca
acagaagacaaatacacgcgggaagatattgaaagagcggcgactctagctcatgcaatg
gaatttattcgcaagatggatggtggcttagatgccatgatcggtgaaaacggagcgagc
ttgtctggcggtcaacgtcagcgtgtggcgatagcacgagcattgttgcgtgatgcacct
gttttgattctggacgaggcgacgtcagccttggatacggaatctgagcgtgccattcaa
tctgctttggatgaactgcaaaaagataagactgtgcttgtgattgctcaccgcctgtcg
accattgaaaatgcagatgaaatcttagttgtggatgaaggtgcaattgtcgaacgtggc
agtcacgctgatttgattgctaaagatggcgcttatgctcagcttcatcgcattcaattt
ggtgcgtag
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