Vibrio alfacsensis: D1115_05095
Help
Entry
D1115_05095 CDS
T05841
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vaf03009
]
D1115_05095
Enzymes [BR:
vaf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
D1115_05095
Ribosome biogenesis [BR:
vaf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D1115_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AXY00703
LinkDB
All DBs
Position
I:complement(1046175..1046879)
Genome browser
AA seq
234 aa
AA seq
DB search
MSSRTSQEKGRRSQQPKSGHFKRSGKSNNTAGQGQKRHARPNRSSSTTKPRIAPEDRKVI
IFNKPYDTLSQFTDGDGRKTLADYIPVKDVYAAGRLDRDSEGLMVLTNDGILQAKLTQPT
SKSPKTYWVQVDGAPSEEDLEKLRQGVELKDGMTLPAKVELMPAPHIWDRIPPVRFRANI
PTTWLAITIIEGRNRQVRRMTAHIGFPTLRLVRYSMGDIVLNDLQPGEWREITI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcgcacgagccaagaaaaaggtcgccgtagccaacaacctaaatcggggcat
tttaaacgctcgggaaagtcaaacaacaccgctgggcaaggtcaaaaaagacacgctcgt
cctaaccggtcttcatcaacgacgaagccaagaatcgctccagaggatcgtaaagtgatc
attttcaataaaccttatgacacattaagccagtttactgatggggacggtcgcaaaaca
cttgcagattacattcctgtaaaagatgtttatgccgctggtcgacttgatcgcgacagt
gaggggttaatggtgttaacaaatgatgggatcttgcaagccaagctgacccaaccgaca
tcaaaatcacctaaaacctattgggttcaagttgatggtgcacctagtgaggaagattta
gaaaagctacgccaaggcgttgagctaaaagatggaatgacactgccagcaaaagtagaa
ctcatgcccgcgccacacatttgggacagaatccctcccgttcgttttcgagccaatatc
cctacgacttggctagcgatcaccatcatagagggaagaaaccgccaagtaagacgtatg
acagcgcacattggcttccctactctgcgtttagtccgctactcgatgggagacattgtg
ttgaatgatctacaacctggtgagtggcgagaaatcaccatctaa
DBGET
integrated database retrieval system
