Vibrio alfacsensis: D1115_05290
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Entry
D1115_05290 CDS
T05841
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00190
Oxidative phosphorylation
vaf01100
Metabolic pathways
vaf02020
Two-component system
Module
vaf_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
D1115_05290 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D1115_05290 (cydB)
Enzymes [BR:
vaf01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
D1115_05290 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
AXY00736
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Position
I:1091838..1092974
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AA seq
378 aa
AA seq
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MFDYEILRLIWWVLIGVLLVGFAITDGFDMGVGALVPIIGKNDTQRRVMINSIAPHWDGN
QVWLITAGGALFAAWPLVYATSFSGFYLAMILTLAALWLRPIGLDYRSKIEDKKWRNTWD
ICISISGFVPPIIFGVAFGNLLQGVPFQLNDFLMPTYHGSFFGLLNPFALLCGLVSLFMI
LMQGATWLQMKTTGDVHTRARNVAQLTGLLTVVAFVAAGFWIQNIDGYVIVGSIDANAPS
NPLNKEVIREAGAWMKNFENYPLLWAAPVLGVAMPLLAVLASRLEKCGIAFLTSSLGNAG
VIFTAGFAMFPFVMPSDLMPSHSLTMWDATSSELTLNLMTGVAFVMVPIILAYTSWTYYK
MFGRLDDKFIEENKNSLY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattacgaaatcttgcgactcatctggtgggtactgatcggtgttctactagtt
ggttttgcaatcacagatggtttcgatatgggtgtgggcgcgcttgtacctattatcggt
aaaaacgacacgcaacgccgtgtaatgattaactcaatcgctcctcactgggatggtaac
caagtttggcttatcaccgctggtggtgcattgttcgccgcttggcctttggtttacgcg
acatcgttctcaggtttctacctagcgatgatcttaactctggctgcactttggctacgt
ccaattggtctggattaccgttcaaagatcgaagacaaaaaatggcgtaacacttgggat
atctgtatctcaatcagtggcttcgttccaccaattatcttcggtgtggcatttggtaac
cttcttcaaggcgtaccgttccagttgaacgactttttgatgccaacgtaccatggttca
ttctttggtctactaaacccgtttgctctgctatgtggtctagttagcttgtttatgatc
ctgatgcaaggtgcaacgtggcttcaaatgaaaaccactggcgacgttcacactcgtgca
cgtaatgttgctcagttaacaggtctactaaccgtggttgcatttgttgcggctggtttc
tggattcaaaatatcgatggctacgtgattgttggtagcattgacgcaaatgcaccatca
aaccctctgaataaagaagttattcgtgaggcaggtgcgtggatgaagaactttgaaaac
tacccactactatgggctgcgcctgtactaggtgttgcaatgccgcttcttgctgtattg
gcatctcgtctagagaagtgtggtatcgcgttcttgacttctagtcttggtaacgcaggc
gttatctttactgctggttttgcaatgttcccattcgtaatgccatcagatttaatgcca
agccacagcttaacaatgtgggatgcgacttcatctgaactgacgcttaacctaatgaca
ggtgttgcgtttgtgatggttcctatcatcctggcttacacatcttggacttactacaag
atgtttggccgattggatgacaagttcatcgaagaaaataaaaactcactttactaa
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