Vibrio alfacsensis: D1115_05855
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Entry
D1115_05855 CDS
T05841
Name
(GenBank) ABC transporter substrate-binding protein
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf01503
Cationic antimicrobial peptide (CAMP) resistance
vaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D1115_05855
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
D1115_05855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_05855
Transporters [BR:
vaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
D1115_05855
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AXY02328
UniProt:
A0ABN5PGJ9
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All DBs
Position
I:complement(1216653..1218272)
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AA seq
539 aa
AA seq
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MKAFLRLSLGLLGIGLLTACGEDIDHQDVRENRFVFCGHGKPSTFNPQLVDSGITAEALS
PQLYDTLLTLDPESHQPVASIAESWTVNDAGTEYIFKIKDGVSFQTTPWFTPTRPLNAQD
VVFSFKRIIDVNHPYHDIGGGFYPWFAGLDFQNLVQDVIALDDQTVKFVLSQPNFAFLAN
IATSHAVILSKEYGNELITHDEKALIDQFPIGSGPFQLKEYQPNDLIRLERHPAYWNTQA
KMKQVVFDISHRGTGTLAKLLRNECDVLASPISSQIPIIQESEQLEIDATPANNVSFIAI
NTDHPALSDVRVRQALNLAINRQNILDSVYYGTGTQAYTLLPPNSWAYQKDSVKIRYDRN
YAIALLREAGFEKGLNLTMWVPLEPRAFDPSPRKTAELIQASFADIGVKLEILTNDRFDR
TQLDSINSIDLLLTGWIGDTGDPDNFFRPLLSCESERVGLNVSMWCNEDFDFLLDLALET
QEPRYRLNLYRQAQNILNEEFPVIPLAHGVQFRVHNKSLTGFKSSPFNAQPFDNVERIH
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttttttaagactatcgctaggcctactcggtattggcttactcaccgcctgc
ggtgaagacatagaccatcaagacgttcgtgaaaatcgatttgtgttttgtggacatggt
aaaccaagtacgtttaatcctcagctcgtagacagcggcattacagcagaagcactgagt
cctcagttgtatgacacgctactcaccctcgatccagaatctcatcaacccgttgctagc
attgctgaaagctggactgtgaatgatgctggtactgagtatatctttaaaattaaggac
ggcgtttcgttccagaccactccttggttcacccctactcgtccactcaatgcacaagat
gttgtgttcagctttaagcgaatcattgatgtaaaccatccgtatcacgatatcggtggt
ggtttttatccatggtttgccggtttggatttccaaaatctggtgcaggatgtgattgca
cttgacgatcaaaccgtgaagttcgttctttctcagccaaactttgcatttcttgccaat
attgccactagccatgccgttattttatctaaagaatatggtaatgagttaattactcat
gacgaaaaggctttaattgaccagtttcctattggttctggaccgtttcaacttaaagaa
tatcaaccaaatgatttgatccgtttagagcgtcatccggcctattggaacacgcaagca
aaaatgaaacaggttgtcttcgatatctctcatcgaggcactggcaccttagctaagttg
ctaagaaatgagtgtgacgttctggcatcacctatttctagccagatcccgattattcaa
gagagtgagcaacttgagattgatgctacacctgcaaataatgtctcattcatcgccatc
aataccgatcaccctgcgctaagtgatgtgcgtgttcgccaagcattgaatttagctatc
aaccgccaaaatatcctcgattcggtttattacggaaccggtacgcaagcctatactctc
ttacctccaaactcttgggcttaccaaaaagacagcgtaaaaattcgctatgacaggaac
tatgcgatcgctttgttgcgagaagctggatttgaaaaaggattgaatctcaccatgtgg
gttcctctagagccacgcgcctttgacccaagcccgcgcaaaaccgccgaattgattcaa
gcgagcttcgctgatattggggtgaagcttgagattttaactaatgaccgttttgaccga
actcaactcgactctatcaacagcatcgacttattactgacgggttggattggcgatacc
ggcgatcccgacaatttcttcagaccgcttctttcttgtgaatctgaacgtgttggtttg
aatgtatccatgtggtgtaacgaagatttcgacttcttgcttgatcttgctttagaaact
caagagcctcgctatcgcttaaatttgtatcgccaagctcaaaacattcttaatgaggaa
tttcctgttattccattagcccatggcgttcaatttcgtgtgcacaataagtcactgacc
ggttttaaatctagcccgttcaacgcacaaccatttgataacgttgagagaatccactga
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