Vibrio alfacsensis: D1115_05860
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Entry
D1115_05860 CDS
T05841
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_05860 (pspF)
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Other transcription factors
Others
D1115_05860 (pspF)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_2
Mg_chelatase
HTH_8
AAA_7
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AXY00821
UniProt:
A0A347UPP2
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Position
I:complement(1218474..1219484)
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AA seq
336 aa
AA seq
DB search
MKQNLIGESPAFLAVLDKVSQLAPIERPVLIIGERGTGKELIAQRLHYLSKRWDKPLLSL
NCATLSEGLIDSELFGHESGSFTGSKGKHKGRFERAEGGTLFLDELATAPLLVQEKLLRV
IEYGEYERVGGHTALTADVRLVCATNADLPQLAKQGDFRADLLDRLAFDVIMLPPLRKRK
EDILSLAQHYAIKMCRELQLEYFVGFTEEAQRSLLDYHWPGNVRELKNVIERAIYRHGLD
ADPIHHLVFNPFEAGWDNSLGHSSNQTEPDQTETERHEHIQFPLDYKQWQEEQDIKLLNS
ALEEAKYNQRQAADLLGLSYHQLRGMVRKYGLVGQN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaacctcattggtgaatcacccgcttttctcgcggtattagataaagtatca
caacttgcaccgattgagcggccagtactcattatcggagaacgaggaacgggcaaagaa
cttattgcacaacgtttacactatttatcaaagcgttgggataagccgctcctttcatta
aactgtgccacgttaagcgagggcttaattgattcagaactgtttggacatgaatcaggt
tcatttacagggtccaaaggcaagcataaaggtcgcttcgaacgtgctgagggtggcact
ttgtttctggatgaattagccacagccccactgttagtgcaagaaaaactgctacgagtg
atcgagtacggtgaatatgaacgagtcggtggtcatactgccctaacggcagatgttcgt
ttagtatgtgcaaccaatgcagatttgcctcaattggccaaacaaggtgactttcgtgcc
gatttgctcgatcgtttagctttcgatgtcattatgcttccgccgttacgcaagagaaaa
gaagacatcctttctttagctcaacactacgcaataaaaatgtgccgtgagctacaattg
gaatactttgtcggctttacagaagaagcacagcgttcattacttgattaccattggcca
ggaaacgtacgtgaacttaagaacgtgatcgagcgtgctatctatcgtcacggattggac
gccgatcctattcaccaccttgtttttaatccatttgaagctggatgggataattcactt
ggtcattcatccaaccaaaccgaacctgaccagacagaaaccgagcgacacgaacacatt
caatttccattagactataaacaatggcaagaagagcaggacattaagctgttaaactct
gcattagaagaggcaaaatataaccaaaggcaagccgctgatttgcttggtttaagttac
catcaattaagagggatggtgagaaagtatggtttagttggccaaaattaa
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