KEGG   Vibrio alfacsensis: D1115_06715
Entry
D1115_06715       CDS       T05841                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vaf  Vibrio alfacsensis
Pathway
vaf03030  DNA replication
vaf03430  Mismatch repair
vaf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1115_06715
   03430 Mismatch repair
    D1115_06715
   03440 Homologous recombination
    D1115_06715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vaf03032]
    D1115_06715
   03400 DNA repair and recombination proteins [BR:vaf03400]
    D1115_06715
Enzymes [BR:vaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1115_06715
DNA replication proteins [BR:vaf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D1115_06715
DNA repair and recombination proteins [BR:vaf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D1115_06715
SSDB
Motif
Pfam: RNase_T NitrOD5 RNase_H_2
Other DBs
NCBI-ProteinID: AXY00967
UniProt: A0ABM6YTB5
LinkDB
Position
I:1419668..1420417
AA seq 249 aa
MMWFSKSKHGDSPLLNTSQTPEWSKLFQQLAAKAKDERLKRYYSTPIADGDTPLKDVPFV
SIDFETTGLNAEEDAILTIGLVPFTIDRVQCLGSRHWIVNPNRELNEESVVIHGITDSEV
RTAPQLEEILDSILEAMSGKVVLVHYKNIERQFFNNALLNTIGEGIQFPVVDTLDIEYAI
QRRQCEGWINRLKGKKPGSVRLGHARERYGLPAYQPHHALTDALATAELFQAQLQHHFDR
EMPLSKVWQ
NT seq 750 nt   +upstreamnt  +downstreamnt
ataatgtggttttctaaaagtaagcacggtgattcaccgttacttaataccagccagact
cctgaatggtcaaagttgtttcagcaattggctgccaaggcgaaagacgaacgacttaag
cgttactactcaacaccaattgcagatggtgatacgccacttaaagacgtgccttttgtg
tctatcgattttgaaaccacaggtttgaacgcagaagaagatgcgattctaaccatcggt
cttgtgccttttactatcgatagagttcaatgtttgggatcacgtcattggatcgtgaac
ccgaaccgagagctaaatgaagagtcggttgttattcatggtattaccgattctgaagta
cgtactgcccctcagttagaagagatactggactcgatcttagaggcgatgagcggaaag
gtggttttggtccactataagaatattgagcgccagtttttcaataacgcgttattaaac
acaataggggaggggattcaattcccggttgtggataccttagatattgagtatgcaatt
caaaggcgtcaatgcgaggggtggataaaccgactaaaaggtaagaaaccggggtccgtg
cgtttggggcatgctcgagagaggtatggtttacctgcttatcagcctcatcatgcttta
acggatgcattggcaacggcggagctatttcaagcccagttacagcaccattttgaccgc
gaaatgccgctgtctaaagtttggcaataa

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