Vibrio alfacsensis: D1115_06985
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Entry
D1115_06985 CDS
T05841
Name
(GenBank) tandem-95 repeat protein
KO
K20276
large repetitive protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D1115_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
CshA_repeat
Big_13
DUF4436
Motif
Other DBs
NCBI-ProteinID:
AXY01014
LinkDB
All DBs
Position
I:1486775..1491034
Genome browser
AA seq
1419 aa
AA seq
DB search
MENTALVSLSGRLVVIGLDGELKVLNDGQQPLPGEVVIAKNDADSERVQLQLVNEDGIQD
ISDDVAQIIGALEQGQDPTLIGDEFAPAAGESNGSSLQASGTIDRIGAELLADTGFETNG
LQALGLSQTQSLTLLEQFNNFSQIPVELNSRPIGANLEVVTDEDTPVSGKLTANDEDGDA
LTFNKTTDPTNGSVTVGAEGNWTYTPNDDYHGSDSFTVEVSDGQGGTDTITVNIGVTPVN
DAPNIVDGNGAPLGDDVSVETSEDTPVSGKLNAADIDGDALTFNKTTDPTNGSVTVGAEG
NWTYTPNDDYHGSDSFTVEVSDGQGGTDTITVNIGVTPVNDAPNIVDGNGAPLGDDVSIE
TSEDTPVSGKLNAADIDGDALTFNKTTDPTNGSVTVDADGNWTYTPNDDYHGSDSFTVEV
SDGQGGTDTITVNIGVTPVNDAPNIVDGNGAPLGDDVSVETSEDTPVSGKLNAADIDGDA
LTFNKTTDPTNGSVTVDADGNWTYTPNDDYHGSDSFTVEVSDGQGGTDTITVNIGVTPVN
DAPNIVDGNGAPLGDDVSVETSEDTPVSGKLNAADVDGDALTFNKTSDPTNGSVTVDADG
NWTYTPNDDYHGSDSFTVEVSDGQGGTDTITVNIGVTPVNDAPEVTITQVENFVEDSGAA
DGSLVAKFETFDEDGDPVSVTLSDTVNYRIEGDTVVLTEAGAALVNSGQELPAFSLTPND
GKVDGEPASADLSVTAVNDAPEVTITQVENFVEDSGAADGSLVAKFETFDEDGDPVSVTL
SDTVNYRIEGDTVVLTEAGAALVNSGQELPAFSLTPNDGKVDGEPASADPSVTAVNDAPE
VTITQVENFVEDSGAADGSLVAKFETFDEDGDPVSVTLSDTVNYRIEGDTVVLTEAGAAL
VNSGQELPAFSLTPNDGKVDGEPASADPSVTAVNDAPEVTITQVENFVEDSDAADGSLVA
KFETFDEDGDPVSVTLSDTENYRIEGDTVVLTEAGAALVNSGQELPAFSLTPNDGKVDGE
PASADPSVTAVNDAPEVTITQVENFVEDSDAADGSLVAKFETFDEDGDPVSVTLSDTVNY
RIEGDTVVLTEAGAALVNSGQELPAFSSDTKRWKSGWGTSECRPERNRSQRRARSDHHQV
ENFVEDSGAADGSLVAKFETFDEDGDPVSVTLSDTVNYRIEGDTVVLTEAGAALVNSGQE
LPAFSLTPNDGKVDGEPASADPSVTAVNDAPEVTITQVENFVEDSGAADGSLVAKFETFD
EDGDPVSVTLSDTVNYRIEGDTVVLTEAGAALVNSGQELPAFSLTPNDGKVDGEPASADP
SVTAVNDAPEVTITQVENFVEDSGAADGSLVAKFETFDEDGDPVSVTLSDTVNYRIEGDT
VVLTEAGAALVNSGQELPAFSLTPNDGKWMANQRVPTQA
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacagccttagtttcacttagtggacgacttgtagtaataggtttggatggg
gaattaaaagttcttaatgatggacaacagcctctaccaggggaagtcgtcatcgctaaa
aatgacgctgattccgaacgcgtacaactacaacttgtaaacgaagatggtattcaagac
atctctgacgatgttgctcaaattattggtgctttagaacaaggccaagatccgacccta
ataggggatgaatttgcaccagctgcgggcgaaagtaatggctccagtttgcaagctagc
ggtacaattgaccgaatcggtgcggaattgctcgcggataccggcttcgaaacgaacggt
ctacaggctttaggcttatctcaaactcaaagccttacgttgctagagcagttcaataat
ttctctcagattcctgttgaattaaacagtcgacctattggtgctaatttagaggtcgtt
actgacgaagatactccggtgagcggtaagcttaccgcaaacgacgaagatggcgatgcg
ctcacgttcaataaaaccaccgatccgaccaacggctcagtcacggtgggtgcagagggt
aactggacctacactccgaacgacgattaccacggctctgacagtttcactgttgaagtg
tctgatggacaaggcggtaccgacacgatcactgtcaacattggtgtgacgccagtgaat
gacgctcccaacattgtcgatggcaatggcgcaccattgggtgacgatgtctcggtagaa
acctcggaagacacgcctgtgagcggcaagctgaacgccgcggatatcgatggcgatgcg
cttacgttcaacaaaaccaccgatccgaccaacggctcagtcacggtgggtgcagagggt
aactggacctacactccgaacgacgattaccacggctctgacagtttcactgttgaagtg
tctgatggtcaaggcggtaccgacacgatcactgtcaacattggtgtgacgccagtgaat
gacgctcccaacattgtcgatggcaatggcgcaccattgggtgacgatgtctcgatagaa
acctcggaagacacgcctgtgagcggcaagctgaacgccgcggatatcgatggcgatgcg
cttacgttcaacaaaaccaccgatccgaccaacggctcagtcacggtggatgcagacggc
aactggacttacaccccgaacgacgattaccacggatccgacagcttcactgttgaagtg
tctgatggtcaaggcggtactgacacgatcaccgtcaatattggcgtgacgccagtgaat
gacgctcccaacattgtcgatggcaatggcgcaccattgggtgacgatgtctcggtagaa
acttcggaagacacgcctgtgagcggcaagctgaacgccgcggatatcgatggcgatgcg
cttacgttcaacaaaaccaccgatccgaccaacggctcagtcacggtggatgcagacggc
aactggacttacaccccgaacgacgattaccacggatccgacagcttcactgttgaagtg
tctgatggtcaaggcggtactgacacgatcaccgtcaatattggcgtgacgccagtgaat
gacgctcccaacattgtcgatggcaatggcgcaccattgggtgacgatgtctcggtagaa
acctcggaagacacgccagtgagcggcaaactgaacgcggcggatgtcgatggcgatgcg
ctcacgttcaataaaacaagcgatccgaccaacggctcagtcacggtggatgccgatggc
aactggacttacactccgaacgacgattaccacggctctgacagctttacggttgaagtg
tctgatggtcaaggcggtaccgacacgattacagtcaatattggcgtgacgccagttaat
gacgcgccagaagtgaccatcactcaggtggagaactttgttgaagacagtggcgcagca
gacggcagcctagtggctaagtttgagacgtttgatgaagacggcgatccagtgagcgtg
acactgagtgacacggtgaactaccgtattgagggcgacacggtggtgttgaccgaggcc
ggagctgcattagtcaactcagggcaagagctgccagcgtttagcttgacaccaaacgat
ggaaaagtggatggcgaaccagcgagtgccgacctaagcgtaaccgcagtcaacgacgcg
ccagaagtgaccatcactcaggtggagaactttgttgaagacagtggcgcagcagacggc
agcctagtggctaagtttgagacgttcgatgaagacggcgatccagtgagcgtgacactg
agtgacacggtgaactaccgtattgagggcgacacggtggtgttgaccgaggccggagct
gcattagtcaactcagggcaagagctgccagcgtttagcttgacaccaaacgatggaaaa
gtggatggcgaaccagcgagtgccgacccaagcgtaaccgcagtcaacgacgcgccagaa
gtgaccatcactcaggtggagaactttgttgaagacagtggcgcagcagacggcagccta
gtggctaagtttgagacgttcgatgaagacggcgatccagtgagcgtgacactgagtgac
acggtgaactaccgtattgagggcgacacggtggtgttgaccgaggccggagctgcatta
gtcaactcagggcaagagctgccagcgtttagcttgacaccaaacgatggaaaagtggat
ggcgaaccagcgagtgccgacccgagcgtaaccgcagtcaacgacgcgccagaagtgacc
atcactcaggtggagaactttgttgaagacagtgacgcagcagacggcagcctagtggct
aagtttgagacgtttgatgaagacggcgatccagtgagcgtgacactgagtgacacagag
aactaccgtattgagggcgacacggtggtgttgactgaggccggagctgcattagtcaac
tcagggcaagagctgccagcgtttagcttgacaccaaacgatggaaaagtggatggggaa
ccagcgagtgccgacccgagcgtaaccgcagtcaacgacgcgccagaagtgaccatcact
caggtggagaactttgttgaagacagtgacgcagcagacggcagcctagtggctaagttt
gagacgtttgatgaagacggcgatccagtgagcgtgacactgagtgacacggtgaactac
cgtattgagggcgacacggtggtgttgaccgaggccggagctgcattagtcaactcaggg
caagagctgccagcgtttagctctgacaccaaacgatggaaaagtggatggggaaccagc
gagtgccgacccgagcgtaaccgcagtcaacgacgcgccagaagtgaccatcaccaggtg
gagaactttgttgaagacagtggcgcagcagacggcagcctagtggctaagtttgagacg
tttgatgaagacggcgatccagtgagcgtgacactgagtgacacggtgaactaccgtatt
gagggcgacacggtggtgttgaccgaggccggagctgcattagtcaactcagggcaagag
ctgccagcgtttagcttgacaccaaacgatggaaaagtggatggcgaaccagcgagtgcc
gacccaagcgtaaccgcagtcaacgacgcgccagaagtgaccatcactcaggtggagaac
tttgttgaagacagtggcgcagcagacggcagcctagtggctaagtttgagacgttcgat
gaagacggcgatccagtgagcgtgacactgagtgacacggtgaactaccgtattgagggc
gacacggtggtgttgactgaggccggagctgcattagtcaactcagggcaagagctgcca
gcgtttagcttgacaccaaacgatggaaaagtggatggcgaaccagcgagtgccgaccca
agcgtaaccgcagtcaacgacgcgccagaagtgaccatcactcaggtggagaactttgtt
gaagacagtggcgcagcagacggcagcctagtggctaagtttgagacgttcgatgaagac
ggcgatccagtgagcgtgacactgagtgacacggtgaactaccgtattgagggcgacacg
gtggtgttgaccgaggccggagctgcattagtcaactcagggcaagagctgccagcgttt
agcttgacaccaaacgatggaaagtggatggcgaaccagcgagtgccgacccaagcgtaa
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