Vibrio alfacsensis: D1115_07400
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Entry
D1115_07400 CDS
T05841
Name
(GenBank) HAMP domain-containing protein
KO
K02482
two-component system, NtrC family, sensor kinase [EC:
2.7.13.3
]
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vaf01001
]
D1115_07400
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vaf02022
]
D1115_07400
Enzymes [BR:
vaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
D1115_07400
Protein kinases [BR:
vaf01001
]
Histidine kinases
NtrC family
D1115_07400
Two-component system [BR:
vaf02022
]
NtrC family
Unclassified
D1115_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
sCache_3_3
HATPase_c
Cache_3-Cache_2
HisKA
sCache_3_2
DUF2630
HAUS-augmin3
Fez1
HAMP
Spectrin_Dys-1
Lipoprotein_20
Motif
Other DBs
NCBI-ProteinID:
AXY01070
LinkDB
All DBs
Position
I:complement(1591963..1593999)
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AA seq
678 aa
AA seq
DB search
MPNSWQSKSVTKWTHRFRTMVRYRLLILTSAPIFLTLIALIGITIYWSIHYTWQNALLDV
SERLGVASNSITLLQQKQANYVKSFAESYDFRARINQNLPQTKLQPWVTEQKKRYDLDFL
SFQRVDSIENKFRFMDLTKRESFFDVLDKAELERLDPDLAKRAEVPILKDGSVEVRGLVS
RTVIPVYNQANDLIGFLDGGILLNNSTMLVDQIRDLIYLGDQDLLRPVGTITVFLDDLRV
STNVPLDSDQRVGRAVGTRVSSEVYDQVLAEGKQWVDRAYVYDAWYITAYQPIKDQYDNV
IGMLYTGYLMWPFVKAYMTNIVEISVITVLLLFISGVMVYRGSRELFNPIEHIHRVVKMI
QLGKETRIGPLDLDDEHELAQLAKQFDNMLDLLRQRKNELQFAANELERKVQKRTASLEE
KTAELELHIQLLNQTRNKLVVHEKLAALGELTAGIAHEINNPSAVILGNVELIQFELGED
AQRVQEELDAIHTQIDRIRNITRSLLQYSRQGGVQDEITWQHVNPIVDESITLVKTGTKK
RDIEFVTLLQAHTPVEVNRHHLLQILVNLQMNAIHAMDGQGKLTVISEDWIEDGDIKGTV
IHVTDEGCGIKPENLSRIFSPFYTTKRDGTGLGLSVSQSILSQTGGELKAVSEWGKGSTF
SIYLPKKAELLLEVTNIA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatagttggcagagtaaaagcgtgaccaagtggacacaccgttttaggactatg
gtgagatatcgcttattgattcttacctccgcgcctatttttttgacgcttattgcactg
attggaattacgatttattggtcgattcactatacatggcaaaacgcattgctcgatgtg
tctgaacgtctaggcgtggccagcaatagtattaccttactacagcaaaagcaggcgaat
tacgttaagtcatttgctgagtcttatgattttagggcgcgcattaaccaaaatctccct
cagacgaagcttcagccgtgggtgacagagcaaaagaaacgttacgatttggatttcctg
tctttccaacgtgttgattcaatagaaaacaaatttcgttttatggatctcactaagcgg
gaatcattcttcgatgtgctagataaagcggagttagagcggttagacccagatctggcg
aaacgtgcagaagtgccgattcttaaagatggaagcgtagaagtgcgcggtcttgtgagt
cgcacagtgattccggtatacaatcaagcgaatgatttgatcggcttcttggatgggggg
atattgctaaacaacagcacgatgttggtagaccaaattcgcgaccttatctatctgggc
gatcaagatttactccgtcctgtaggcacaattaccgtatttttggatgatttacgtgtg
agcaccaacgtaccactggacagtgaccaacgtgtgggtcgtgcggttggtacgcgagtg
agtagtgaggtgtacgaccaggtgctggcagagggtaagcaatgggtcgatcgtgcttat
gtgtatgacgcttggtatatcaccgcgtatcagccaatcaaagaccaatacgacaatgtt
attggcatgctttataccggttacttgatgtggccatttgtgaaagcgtacatgacaaac
attgttgaaattagtgtcattactgtcctgttgctctttatttctggagtcatggtttat
cgtggctctagagagttatttaatccgatcgaacacattcatcgcgttgttaagatgatt
caattggggaaagaaacacgcattggaccactggatcttgacgatgagcatgagttagca
caactagcgaagcagtttgacaacatgctggacctactaaggcagcgtaaaaatgaactt
caatttgcggcaaacgagctagagagaaaagttcagaaacgtacggcgagtcttgaagaa
aaaaccgcagagctagagttacatatccaattgctcaaccagactcggaacaagttggtt
gtacatgagaagctggctgcattaggcgaactaacggctggtattgcacatgagatcaac
aatccgagtgcagtgatactgggcaatgtagagttgatccagtttgagttaggagaagat
gcccaacgtgttcaagaagagctggatgctattcatacccagattgaccgtattcgtaat
atcacgcgaagtttgttgcagtacagtcgtcaaggtggtgtacaggatgaaataacatgg
caacacgtcaacccaattgtcgacgagagtatcaccttggtgaaaacgggtaccaagaag
cgagacatagagtttgtcacgctcttgcaggcccatacaccagtagaggtaaatcgccat
catttattgcaaatactggtgaacctgcaaatgaatgcgattcatgctatggatggtcaa
ggtaagttgactgttatcagcgaagattggattgaagacggcgacatcaaaggcacggtg
attcatgttaccgatgagggttgtggtatcaaaccagaaaacttaagccgtattttctcg
ccgttttataccaccaaacgagatggtacaggccttgggttatccgtttcacaaagtatt
ttgagccaaactggcggtgagttaaaagcggtgtcggaatggggcaagggaagtacgttc
agtatctacctgccgaagaaagccgagctgctacttgaagtgaccaatatcgcttaa
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