KEGG   Vibrio alfacsensis: D1115_09585
Entry
D1115_09585       CDS       T05841                                 
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
vaf  Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:vaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vaf03400]
    D1115_09585
Enzymes [BR:vaf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1115_09585
DNA repair and recombination proteins [BR:vaf03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    D1115_09585
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNApolII_N DNA_pol_B_2 DNApolII_insertion HTH_52
Other DBs
NCBI-ProteinID: AXY01375
UniProt: A0ABN5PJH2
LinkDB
Position
I:1940691..1943054
AA seq 787 aa
MNIQQGFLLTRQARDIKGKTQIELWLSTDNGPTQLLIQEEKPVFFLQNGHIEQVKKLAQA
HHITCDIRPLELKNFQLKPLAACYSHTTRDALALQDLLSQNELTHYEGDIRLADRYLMER
FIKGSMEYTGNIQIQNGFQRVLNAKCRRGEYQPKLHVVSLDVECSEKGILYSIGLDSPAD
SRVIMIGEPEPAETSIQWVKDERALLEALIAWFNSFDPDVIIGWNVIDFDFRLLHKRAEW
HNMKLMLGRADQASFFRSSAQSQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESVSQEL
LGEGKEIHNVHDRMDEINRMYRSDKPSLAKYNLQDCVLVNKIFNHTHLLDFAIERSRLTG
VELDRIGGSVAAFTNLYLPQIHRAGYVAPNLHPEDWIASPGGYVMDSIPNLYESVLVLDF
KSLYPSIIRSFLIDPMGLIEGLQQEIGKLDHQSVPGFRGGQFHRTKHFLPEMIENLWAAR
DIAKKNNEKAFSQAIKIIMNSFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIEEK
GYQVIYGDTDSTFVSLNGAFSQADADKIGNELVDYINQWWSDHLRREYNLNSILELEYET
HYRKFLMPTIRGAETGSKKRYAGLIGEGQHERIIFKGLESARTDWTPLAQKFQNTLYQMI
FHGEDPSDYVREVVEKTNSGEFNDQLVYQKRLRRKLHEYQKNIPPQVRAARIADDINAKL
GRPLQYQNRGRIEYLITVNGPEPREYSSSPIDYQHYIDKQLKPVADAILPFIGTDFEQLS
APQMGLF
NT seq 2364 nt   +upstreamnt  +downstreamnt
ttgaatatccagcaaggctttcttctgactcgacaagctcgagatataaaaggaaaaaca
caaatagagctttggctgtcaacagataacggcccaactcaactgctgattcaagaagaa
aaaccggtattttttctccagaatggtcatattgaacaagtcaaaaagttggctcaagct
catcatattacttgtgatattcgcccgttagagttaaagaatttccaactcaagccactc
gcagcctgctattcgcacactacccgagatgcattggcgctgcaggatctactaagccaa
aatgaactgacgcactacgagggcgatatacgactcgcggatcgctacttaatggagcgc
ttcattaaaggaagcatggagtacaccggcaatatacaaattcaaaatggtttccaacga
gtcctaaatgccaaatgtcgccgtggtgaataccaaccgaaacttcatgtcgtttcactc
gatgtagagtgttctgaaaaaggcattttatactccattgggttagacagccctgctgac
tctcgcgtcatcatgatcggtgaacctgaaccggcagaaacgtcgattcaatgggtaaaa
gacgaacgtgccttgcttgaagcattgatcgcttggtttaacagttttgatccagatgta
attatcggttggaacgttattgattttgattttcgcttactgcataagcgtgctgagtgg
cataacatgaagttaatgcttggccgtgctgatcaagcgagttttttccgtagctcagct
caaagtcaacaagggtttatctccatacctgggcgtgtcgttctagatggtattgatacc
ttaaagacggcgacctatcactttcgctcttggtcactggaatcggtctctcaagaactg
ctcggtgagggtaaagaaattcataacgtgcatgaccgaatggatgaaatcaatcgcatg
taccgttccgataaaccctcgttagcaaaatacaacttgcaagattgtgtgttggtaaac
aaaatcttcaatcatacccacctacttgattttgccattgagcgctctcgcttaactggt
gtcgagcttgatcgcattggcggttctgttgctgcgtttactaacttatatttgccacag
attcatcgcgcgggctatgtggcaccaaacctacacccagaagattggattgcgagtccc
ggcggttatgtaatggactcaatacccaacctgtacgaatctgttttagtcttagacttt
aagagcctttacccctctattattcgctcatttctcattgacccaatggggttgattgag
ggcttacaacaagaaattggcaaactcgaccatcaatctgtccccggctttcgaggcggt
caatttcatcgcaccaaacacttcttaccagagatgatcgaaaacctctgggcagccaga
gatatcgcaaagaaaaataacgaaaaagcattctctcaagcaattaagatcatcatgaac
tcattttatggtgttttaggctcttctggttgccgcttctttgatacacgcctcgcgtct
agcatcactatgcgtggacacgagatcatgaagcaaaccaaggtgctcatcgaagagaaa
ggctatcaggtgatttatggtgatacggactcgacttttgtgtctttaaatggcgcgttt
agccaagcagacgcagataagattggtaatgagttggtcgactatatcaaccaatggtgg
agtgaccacttgcgtcgcgagtacaatctaaactcgatccttgaactcgaatatgaaacc
cactatcgcaaatttttgatgccgacgattcgtggtgcagaaactgggtctaaaaaacgc
tacgcgggtttaattggagagggtcagcacgagcgcatcatctttaaaggactcgaaagc
gcacgaacagattggacaccattagcacagaagtttcaaaacacgctgtatcaaatgata
ttccatggtgaagatccgagtgattacgttcgcgaggttgtagaaaaaaccaacagcggc
gagttcaatgatcagctggtgtatcaaaaacgtctgcgccgcaagttacacgaataccaa
aagaatatccccccacaagtacgagctgcgcgcatagcggatgatatcaacgcaaaacta
ggacgccctttacaatatcaaaaccgtggacgtattgaatatttgatcaccgtaaatggc
cctgagcctagagaatactcatcaagcccaatcgattatcaacactatattgataagcag
ttaaaacctgtcgctgatgcgatcttgccgtttattggtaccgattttgagcaattgtct
gccccacagatggggctattctaa

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