Vibrio alfacsensis: D1115_09870
Help
Entry
D1115_09870 CDS
T05841
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_09870
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
D1115_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
Trp_repressor
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AXY01425
LinkDB
All DBs
Position
I:2012024..2013031
Genome browser
AA seq
335 aa
AA seq
DB search
MATIKDVAKEAGVSIATASRVINNAPHTSDAAIVAVKEAMAKLGYRPNATARALVNKSSN
AIGVLVNDVSAPFFGTMVKAIDTIANEQGKQLLIGSGYHDAVKERNAINMLLDSQCESLV
VHSKGMTDAELTSLADDIPGLVVINRVVPNMASRCIALDNRKGSYIATEHLIRNGHRHIG
YLCSNHDIEDAHDRREGYLDALRDNSIEIREEYIEYGEPDETGGEQAIVNLLAKNTPVTA
IATYNDYMAAGCMTLLQENGINIPEHMSVIGFDDGHIARYIYPRLTTIRYPIQVMANEAV
KLSLQLVAGQEMERSECKLFMPILVRRASVGSNPK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctactatcaaagacgtcgcaaaagaagcaggcgtatccattgcaaccgcatctcgc
gtgatcaataacgcgcctcacactagtgatgcagctattgttgctgttaaagaagcaatg
gcaaaactggggtatcgccccaatgccactgctcgcgctttggtgaacaaatcctcaaat
gccattggtgttttagttaacgacgtatcggcaccgttttttggcaccatggtcaaagcc
atcgacaccattgcaaacgagcaaggaaaacagcttcttattggcagtggttatcacgat
gcggtcaaagaacgcaatgccattaatatgctgctcgacagccaatgtgaatcgttagta
gtccacagtaagggcatgaccgatgccgaactcacatcactcgcagatgatattcccggc
ctagtcgtaatcaaccgagtagtaccaaacatggcttctcgttgtattgctctcgataac
cgtaaaggctcctacatcgcgacggagcatcttattcgtaatggtcatcgacatattggt
tatctttgctcaaatcatgatatcgaagatgctcatgacagacgcgaaggctatctagat
gcgcttcgcgacaacagcatcgagattcgcgaagagtacattgaatatggtgaaccagat
gaaaccggcggcgaacaagccattgtcaacttgctagccaaaaacactccagttacggca
atcgccacctacaacgactatatggctgcgggttgtatgaccttactgcaagaaaatggc
attaacatcccagagcacatgtccgtcattggctttgatgatggtcatatcgcccgttat
atataccctcggttgacaaccattcgctacccaattcaagtaatggcaaacgaagcggtg
aaactttccctacagttggttgcaggtcaagaaatggaacgttctgagtgtaaactcttt
atgccaatccttgtgcgtcgtgcatctgtaggctcaaaccccaaataa
DBGET
integrated database retrieval system
