Vibrio alfacsensis: D1115_10670
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Entry
D1115_10670 CDS
T05841
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vaf03032
]
D1115_10670
03036 Chromosome and associated proteins [BR:
vaf03036
]
D1115_10670
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_10670
DNA replication proteins [BR:
vaf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D1115_10670
Chromosome and associated proteins [BR:
vaf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
D1115_10670
DNA repair and recombination proteins [BR:
vaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
D1115_10670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
GTP_EFTU_D2
HU-CCDC81_euk_1
VWA_2
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
AXY01548
LinkDB
All DBs
Position
I:complement(2188355..2188627)
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AA seq
90 aa
AA seq
DB search
MNKTQLVEQIAQNADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPAFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaactcagttagtagaacaaatcgcacaaaacgcagatatttctaaagcatca
gctggccgcgctctagacgcattcattgaagcagtaagtggtacgcttcagtctggtgac
caagttgcacttgttggctttggtacatttagcgtacgtactcgtgcagctcgcacaggt
cgtaaccctaagactggtgaagaaatccaaatcgcagaagcgaaagtgccagcgtttaaa
gcgggtaaagcgcttaaagacgcttgtaactaa
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