Vibrio alfacsensis: D1115_11610
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Entry
D1115_11610 CDS
T05841
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaf03016
]
D1115_11610 (miaB)
Enzymes [BR:
vaf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
D1115_11610 (miaB)
Transfer RNA biogenesis [BR:
vaf03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
D1115_11610 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AXY01683
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All DBs
Position
I:2366996..2368420
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRERAPYVDVIFGPQTLHRLPEMIKQSLS
DEAPVMDISFPEIEKFDSLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLYEIAQLAEQGVREVNLLGQNVNAYRGPMHDGEICSFAELLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRVLTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDLAEEVKKE
RLYELQQTINTQAMRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGNADLIG
QFVDVKITDVFANSLRGELVRTEKDMDLRSVISPMQMMAKTRREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaatgctgcaaacggctatgagctgactgaagagccagaggaa
gcagacgtacttctactcaacacctgttcgatccgtgaaaaggcgcaagagaaagttttc
caccagctaggccgctggaaaacactaaaagataaaaaacctggcgtagttatcggtgta
ggtggttgtgtagcaactcaagagggtgaccatatccgtgaacgtgcaccatacgttgat
gtgatctttggcccacaaacgcttcaccgtctacctgagatgatcaaacaatctctgtcg
gatgaagcccctgttatggatatttcattccctgagatcgaaaagttcgatagcctacca
gagcctcgcgctgaaggtgcaactgcattcgtatctatcatggaaggctgttctaaatac
tgcacttactgtgtagtaccatacactcgtggcgaagaagttagccgcccaatggatgac
gttctttacgaaatcgcgcagcttgcagagcaaggcgttcgtgaagtaaacctactaggc
cagaacgtaaacgcctaccgtggcccaatgcacgacggtgaaatttgttcatttgcagaa
ctgcttcgtctggttgcgtctatcgatggtattgatcgtattcgcttcacaacaagccac
ccacttgagtttacagatgatatcatcgcagtatacgaagacacgccagagctagtaagc
ttcctgcaccttcctgtacaaagtggtagtgatcgcgttcttaccatgatgaaacgccct
cacactgcgattgagtacaagtcaatcatccgtaaactacgtaaagctcgtcctgatatt
caaatcagttctgactttatcgttggtttccctggtgagacagacaaagatttccaagac
acaatgaagctaatcaaagatgtagactttgacatgagctttagctttattttctctcct
cgtccaggtacaccagcggcagattacccttgtgaccttgctgaagaagtgaaaaaagag
cgtttatacgaactgcaacaaaccatcaatacacaagcaatgcgctactctcgcctaatg
ctaggtactgagcaacgcgttttggttgaaggtccttctaagaagaatctaatggagctt
cgtgctcgtacagaaaacaaccgtgtagtaaactttgaaggtaacgcagacctaattggt
cagttcgttgacgtgaaaattaccgatgtatttgctaactcactacgtggtgagctcgta
cgtacagaaaaagacatggaccttcgtagtgtgatttcaccaatgcaaatgatggcgaaa
acacgtcgcgaagatgagctaggtgtagcgacttttacgccataa
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