Vibrio alfacsensis: D1115_12565
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Entry
D1115_12565 CDS
T05841
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vaf03110
]
D1115_12565 (clpB)
Chaperones and folding catalysts [BR:
vaf03110
]
Heat shock proteins
HSP100
D1115_12565 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
nSTAND3
AAA_14
AAA_18
TniB
bpMoxR
AAA_24
IstB_IS21
NBD_SMAX1
AAA_7
Zeta_toxin
DUF815
AAA_19
NACHT
RHH_3
Motif
Other DBs
NCBI-ProteinID:
AXY01841
LinkDB
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Position
I:complement(2571422..2573995)
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLDVDVTHL
RSKLSEMLDRLPKVSGIGGDVQLSSSMGTLFNLCDKVAQKRQDSYISSEVFLLAALEDRG
PLGQLLKEVGLSEQKVSQAIEKIRGGQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL
DMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKII
QLKIEQQALSNEHDEASEKRLDVLNDELNEKEREYAELEEVWNAEKAALSGTQHIKSELE
QARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDNEIAEVL
SKQTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGS
FLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSARIQENFATLDYQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLG
RLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQNVENPLAKSILAGQILP
DKKIQLIVNNDQIIAHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgatagatttacaagtaagtttcaaatcgctatctctgatgctcagtcacta
gcgttagggcgcgatcatcaatatatcgaacccgtgcacctaatggtggcactgcttgat
cagaacggtagcccaattcgtccactgctaacgatgttagacgtcgacgtgactcattta
cgctctaagttaagcgaaatgctagaccgactgcctaaagtcagtggtatcggtggtgat
gttcagttgtctagctctatggggacacttttcaatttatgtgacaaagtagctcaaaag
cgtcaggactcctacatctcgtctgaagtctttttgcttgctgcattagaagatcgcggt
ccacttggtcagttgttaaaagaggtgggcttgagcgagcaaaaagttagccaagcgatc
gaaaagatcaggggtggacaaaaagtcaatgatcctaatgcggaagagcttcgccaagcg
ttggaaaagtttactatagaccttactgaacgtgcagagcaggggaagttggatccggta
atcggtcgtgatgatgaaatccgtcgtactatccaagtgttgcaacgccgcacgaaaaac
aaccctgtgatcattggtgaaccaggtgtgggtaaaaccgctatcgtcgaggggttggct
cagcgcattatcaacaatgaagttcccgaggggctgcgtggtcgccgtgtgttgtcatta
gatatgggcgcacttgttgccggagctaagtatcgtggtgagtttgaagagcgtttgaaa
tcggtattgaatgaactcgctaaagaagaaggtaacgtcattctgtttatcgacgagctt
cataccatggttggtgccggtaagggcgagggctctatggacgcaggtaacatgctaaaa
cctgcactagctcgtggtgagcttcactgtgtgggtgctacaaccttagatgaataccgt
caatatatagagaaagacgccgcacttgagcgtcgtttccaaaaagtgctggtggatgag
ccaagtgtcgaagatacgattgcgattctacgtggcttgaaagaacgttatgagcttcat
catcatgtagagattaccgatcctgcgatcgttgctgctgcaagtttgtcgcatcgttat
gtttcggatcgccagttacccgataaagcgatcgaccttattgatgaagcagcctctagc
attcgtctacagatcgactccaagccagagtctttagacaaactcgaacgtaaaatcatc
caacttaagatcgagcagcaagcgctgagcaacgagcatgatgaagcaagtgaaaaacgc
ttagacgtgcttaacgacgagttgaacgagaaagaacgtgaatatgcagagctggaagaa
gtgtggaatgctgaaaaagcagcactatctggcactcaacatattaaaagtgagttagag
caagcccgaatggatatggattttgcacgccgagccggtgatctaaaccgcatgtcggag
ctgcaatatggccgtattcctgaacttgaaaaacagctcgatcttgctactcaagctgaa
atgcaagagatgacgctactgcgtaataaggtgactgacaatgagattgcagaagtactc
tctaagcaaacgggtattcccgtctctaaaatgctcgaagcagaaaaagaaaaactgctt
cgcatggaagaggtgctgcacaaacgtgtgattggtcaggcagaagcggttgaagtggtg
tctaacgcaattcgtcgtagtcgagctggcttatccgatccaaacaaaccgattggttcc
ttcttattcttaggtccaacaggtgtgggtaaaactgaactatgtaagacactcgctagc
ttcatgtttgatagcgaagatgccatggtacgtatcgatatgtccgagttcatggagaaa
cactctgtggcgagattggttggtgcgcctccgggttatgttggctatgaagaaggtggc
tatttaacagaagccgttcgccgtaaaccttattctgtcatccttttagatgaagtagag
aaggcacacccagatgtgttcaatattctgctgcaagtattggatgatggtagattaact
gatggtcaaggtagaacggtggatttccgtaataccgtagtgatcatgacatcgaactta
ggttcagctcgaatccaagagaactttgctactctggattaccaaggtattaagaatgaa
gtgatggatgtggtcagtaaacacttccgtccagagtttttaaaccgcgttgatgaaagc
gtggtattccatccgcttggccaagagcacattaagtcgattgcttctattcagttaggt
cgtttggctaaacgattagaagagaaaggttatcaattagaggtatctgacaaagcgctc
gatctgattgctcaagttggtttcgatcctgtgtatggtgcgcgacctctaaaacgtgca
attcaacagaatgttgagaatccattagcgaaatcaatcttggctggtcaaatactgcca
gataagaaaattcagctgattgtgaacaatgaccaaatcattgctcaccagtaa
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