Vibrio alfacsensis: D1115_12720
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Entry
D1115_12720 CDS
T05841
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_12720 (nhaR)
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D1115_12720 (nhaR)
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
EFG_III
HTH_29
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AXY01869
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Position
I:complement(2606952..2607842)
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AA seq
296 aa
AA seq
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MSHLNYNHLYYFWMVCKQGSVTKAAEALFLTPQTVTGQIKAFEERMKGKLTKRNGRSVEP
TELGQLVFKYADRMFGLSYEMLDIVNYSQHSNILFEVGVADALSKRLVSKVLMTTVPEDN
SIHLRCYESTHELLLERLSQHKLDMILSDCPVDSTQSPGLYSKKLGECSMSFFASSDVPD
VKFPEVLEKKKLLIPGSRTAMGRKVLQWFDRQGLQPDVLGEFDDVALMKAFARYRDDVIF
LAPTVYMSEIEDDRSLQLLGHVEDLKEEYYVIFAERMIQHPAVKNVCDADFGQMFE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatttaaattataatcacctctattacttctggatggtctgcaagcaagggtcg
gtcactaaagctgcagaagcgttgtttttgacaccacaaacggtgacaggacaaattaaa
gcgtttgaagaacgtatgaaaggcaagttgactaagcgaaatggtcgtagtgtagagcca
acagaattagggcagttggtttttaaatacgcagaccgtatgtttggtttgagctatgaa
atgctcgatatcgtcaattacagtcagcattctaatatcttgtttgaagtgggtgttgcg
gatgcactctcaaagcgtttggttagtaaggtacttatgacaacggtaccagaagacaat
agcattcacttgcgttgctatgagtcgacgcacgaattacttctagagcgactttctcaa
cataagttggatatgattctttctgattgccctgtcgattcaacgcaaagtccaggcttg
tacagcaaaaagttaggtgaatgtagtatgagctttttcgcctcttcagatgttcctgat
gttaagtttcctgaagttttagagaagaagaaactcctgatcccgggaagtcgaacggca
atggggcgcaaggtactgcaatggtttgataggcaggggttacaaccggacgtattggga
gagtttgatgatgtcgcgttaatgaaagcatttgcacgttatcgtgacgacgtgatcttt
ttagcaccaacggtttatatgtcagagatagaagatgatcgcagcttgcagctacttgga
catgtcgaggatttaaaggaagagtattacgtgatctttgccgaacgaatgatccaacat
cccgcagtgaagaacgtatgtgatgcagattttggtcaaatgtttgaatga
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