Vibrio alfacsensis: D1115_12790
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Entry
D1115_12790 CDS
T05841
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D1115_12790 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vaf01007
]
D1115_12790 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaf03016
]
D1115_12790 (lysS)
Enzymes [BR:
vaf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
D1115_12790 (lysS)
Amino acid related enzymes [BR:
vaf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
D1115_12790 (lysS)
Transfer RNA biogenesis [BR:
vaf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D1115_12790 (lysS)
Prokaryotic type
Other AARSs
D1115_12790 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXY01882
LinkDB
All DBs
Position
I:complement(2621809..2623341)
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AA seq
510 aa
AA seq
DB search
MTDAVQNETVQEASTQEENKLIAERRAKLDAIRKSCKANGHPNDFRRDALAGDLQKEFGE
KTKEELEELNHVVAIAGRIMAKRGPFLVIQETSGRIQAYADKEVQKVLKDQYQGLDIGDI
IGVKGALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSR
NAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPE
LYLKRLVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEELLSSV
ALEVLGSTSMPYGEDTVEFGGTYTRMSMFEAIKHYNPDHAQIQALTEEDIQNRDLMVSIA
KSVHVEVESFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPLARRSDDNPFFTDRFE
FFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQ
GIGIDRLVMLLTNTHTIRDVILFPAMRPQA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgctgttcaaaacgaaactgtacaagaagcctctacacaagaagagaataag
ctgattgctgagcgccgcgctaaactggatgcaatccgaaagagctgcaaagcaaacggc
cacccaaacgacttccgtcgtgacgcactcgcgggcgaccttcaaaaagagttcggtgaa
aagactaaggaagagctagaagagcttaaccacgtagtagcaattgctggccgtattatg
gctaagcgtggtccattcctagtgattcaagaaacgtctggccgcatccaagcttacgct
gacaaagaagtacagaaagtactgaaagatcaataccaaggtctagatatcggtgacatc
atcggtgttaaaggtgcgctacacaaatctggtaagggcgacctatacgtgaacatggaa
gagtacgagttgctaaccaaagctcttcgtccactaccagagaagttccacggtctaact
gaccaagagatgcgttaccgtcaacgttacgtagatctgatcgttaacgaagattctcgt
aatgcattcgtagttcgttctaaagtgatgtctgcaatccgtaacttcatgatctctaag
cagttcatggaagttgaaacgccaatgatgcacgttatccctggcggtgcgagtgcgcgt
ccatttatcacgcaccacaatgcgctagacatgccaatgtacttacgtatcgcgccagaa
ctatacctaaaacgtctagttgttggtggtttcgatcgtgtattcgaaattaaccgtaac
ttccgtaacgaaggtctttctccacgtcacaaccctgaattcactatgatggaattctac
atggcgtacgcggattacaaagatctgatggatctaactgaagaactactaagttcagtc
gctctagaagtacttggttctacatcaatgccttacggtgaagatactgtagaatttggc
ggcacttacacgcgtatgagcatgtttgaagcaatcaaacactacaaccctgaccatgcg
caaattcaagcgctaacagaagaagatattcaaaaccgtgacctaatggtttctatcgcg
aaatctgttcacgttgaagtagaatctttctggacatgtggtcagcttcttgaagaaatc
ttcggtgaaactgctgaacctaagctaatgcagccaacgttcatcactggctacccagcg
gacatctctccactggctcgtcgtagcgatgataatccattcttcacagaccgctttgag
ttcttcatcggtggccgtgaagtagcgaacggtttctctgagcttaacgatgcagaagac
caagatgcgcgctttaaagcacaggttgaagcgaaagagtctggcgatgatgaagcaatg
ttctacgatgcagactacatcactgcactagagcacggcctaccgccaacagcaggtcaa
ggtatcggtatcgaccgtttagttatgctattgactaacacgcacactatccgtgacgta
attctgttcccagcaatgcgtccacaagcgtaa
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