Vibrio alfacsensis: D1115_12810
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Entry
D1115_12810 CDS
T05841
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vaf03036
]
D1115_12810 (xerD)
Chromosome and associated proteins [BR:
vaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D1115_12810 (xerD)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_5
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AXY01886
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Position
I:complement(2627286..2628203)
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AA seq
305 aa
AA seq
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MTAQQTVNQQDFGLVEQFLDAMWMERGLSENTLASYRNDLMKLLTWMAKNNYRLDFISFS
GLQEYQAYLVDLEYKQTSRARMLSAIRRLFQYIHREKVRSDDPSALLVSPKLPQRLPKDI
SEEQVDALLDAPDPNDPIELRDKAMLELLYATGLRVTELVSLTMENVSLRQGVVRVTGKG
GKERLVPMGENAVDWIETFIKQGRSALLGDTTSDVVFPSKRARQMTRQTFWHRIKYYAVI
AEIDTDLLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHSQ
HHPRA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacaacagactgtcaatcaacaagattttgggcttgttgagcaatttttagat
gcgatgtggatggagcgtggtctatcagaaaacacgttggcttcttatcgaaatgatttg
atgaaattgcttacatggatggcgaaaaataactaccgtctcgattttatcagcttttca
gggcttcaagaatatcaggcatatcttgtagatttggagtataaacagacgtctcgcgca
cgtatgctatcggcaattcgtcgtttgtttcaatatattcatagagagaaagtgcgatcg
gacgatccaagtgccttgttagtgagtccgaaattgccccaacgcttgccaaaagatatc
agtgaagagcaagtggacgcattattggatgcgccggatccgaatgatcccatagagctt
cgcgataaagctatgttagagctgctttacgccacggggctacgtgttacagagcttgtc
agtctgacaatggaaaatgttagcttacgtcaaggcgtagtgcgtgtaacaggtaaaggt
gggaaagagcgtcttgtgcctatgggggagaacgcggtcgattggattgaaacatttatt
aagcaaggccggtctgcactattgggtgataccacgtcggatgttgtttttccaagtaag
cgagcgagacaaatgactcgccaaaccttttggcatcgtattaaatactatgcggtgatt
gccgagattgacacagacctgttgtcgccgcacgtattgcgccatgcgttcgcaacgcat
ttattgaactatggtgcagatctcagggtcgtacagatgctcttagggcatagtgactta
tcgactacgcaaatttatactcacgtggcgactgagcgattgaagcaaattcacagtcaa
caccacccaagagcataa
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