Vibrio alfacsensis: D1115_12855
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Entry
D1115_12855 CDS
T05841
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1115_12855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_12855
Enzymes [BR:
vaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
D1115_12855
DNA repair and recombination proteins [BR:
vaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1115_12855
Prokaryotic type
D1115_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXY01893
LinkDB
All DBs
Position
I:complement(2637051..2637743)
Genome browser
AA seq
230 aa
AA seq
DB search
MNQLPTWHDVIGEEKQQSYLIDTLKFVEAERASGKAIFPPEEDVFNAFRFTEFGDVKVVI
LGQDPYHGPHQAHGLCFSVLPGIKTPPSLVNMYKELAQDIDGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVFLLWGAHAQKKGRFIDRSKH
HVLEAPHPSPLSAHRGFFGCQHFSQTNQILEQQGLEPINWHLPVAISFFD
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttacccacttggcacgatgtgatcggtgaagaaaagcaacagagctacctt
attgatacgctaaaatttgttgaagcagagcgcgcgtcaggcaaagcaatttttcctcca
gaggaagacgtgtttaatgcttttcgctttactgaatttggtgatgtgaaagttgtaata
ttagggcaagatccatatcacgggccacatcaagctcatggattgtgtttctctgtgttg
cctggcattaaaacgcccccatctttagtgaatatgtataaagaacttgcgcaggatatt
gatgggttccaaattccgcagcacggctttttgcaaagttgggcagagcaaggagtgttg
ctgctcaatacggtattgaccgtagaacaaggcaaggcacattcacactcaaaaaccggt
tgggagacgtttaccgatcgagtcattgaagcgatcaatcaacatcagcatggtgtcgta
ttcttactttggggagcacacgcacagaagaaaggacgttttattgatcgttcaaaacat
catgtgcttgaagctccacatccatcgccactttctgcacatagaggcttctttggctgc
caacatttttcgcaaaccaatcaaattcttgagcaacaaggtctagagccgattaactgg
cacttaccggtagcgatatcgttttttgattga
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