Vibrio alfacsensis: D1115_12985
Help
Entry
D1115_12985 CDS
T05841
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00220
Arginine biosynthesis
vaf00240
Pyrimidine metabolism
vaf00250
Alanine, aspartate and glutamate metabolism
vaf01100
Metabolic pathways
vaf01110
Biosynthesis of secondary metabolites
vaf01240
Biosynthesis of cofactors
Module
vaf_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
D1115_12985
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
D1115_12985
00220 Arginine biosynthesis
D1115_12985
Enzymes [BR:
vaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
D1115_12985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
AXY01915
UniProt:
A0ABN5PL54
LinkDB
All DBs
Position
I:complement(2670407..2673640)
Genome browser
AA seq
1077 aa
AA seq
DB search
MPKRTDIQSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPDM
ADATYIEPIQWEVVRKIIEKERPDAVLPTMGGQTALNCALDLEKHGVLAEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRADTAKTMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKADNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELQNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGATGFDEMVDLDAPDA
LTKIRHELKEAGAERIWYIADAFRAGMSVDGVFNLTQIDRWFLVQIEDIVKLEQELKAKG
FAGLNKDELIKLKRKGFADARLSKILGVAESEIRRLRDQYDIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPSDKDKIMILGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLAIARVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQVAVDRLGLLQPQNATVTTMEQAVEKSREIGFPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNESPVLLDSFLDDAVEVDVDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDVMREQVEKLAFELGVRGLMNTQFAVKNNQVYLIE
VNPRAARTVPFVSKATGAPIAKIAARVMAGQSLESQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGTTFAEAYAKAELGCGNVYPEGGRALLSVREGDKERVVDLA
SKLSKLGYQLDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYTYIVNTAAGRQ
AIEDSKVLRRGALAEKVNYTTTLNAAFATCMAHTADAKSSVTSVQELHAKVKASLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacattcaaagtattcttattcttggtgctggtccgattgttatc
ggtcaggcatgtgagtttgactactctggcgcacaagcgtgtaaagcactgcgtgaagag
ggttaccgagttatcctagtgaactcgaaccctgcaaccatcatgacagacccagacatg
gcggatgcaacttatattgaaccaatccaatgggaagtcgttcgcaagatcatcgagaaa
gagcgtccagatgccgtactgccaacaatgggtggtcaaactgcacttaactgtgctcta
gacttagagaagcatggcgttcttgctgaatttggcgtagagatgatcggtgcaacggcg
gatgcgattgataaagcagaagaccgttctcgcttcgataaagcgatgaagtctattggc
cttgagtgccctcgtgctgatactgcaaaaaccatggaagaggcttacaaagttctcgat
atggttggtttcccttgtatcatccgtccgtctttcaccatgggtggtacaggcggtggt
atcgcatacaacaaagaagaatttgaagaaatctgtcgtcgtggtctcgacctttctcct
acgaacgaacttctgatcgatgaatctctaattggttggaaagagtatgagatggaagtg
gttcgtgacaaagcggacaactgtatcatcgtatgtgcgattgaaaactttgacccaatg
ggcatccatactggtgactcaatcacggtggcgccagcacaaactctgacggataaagaa
taccagctaatgcgcaatgcatcgctagcagtacttcgtgaaatcggtgttgaaacgggc
ggttcaaacgtacagtttggtatcaacccgaaagatggccgcatggttatcattgagatg
aacccacgtgtatctcgttcttctgctcttgcatcgaaagcaacgggtttcccaatcgcg
aagattgcagcgaaactagcagttggcttcacactagatgaattgcaaaatgatatcact
ggtggtgcaacgccagcatcattcgaaccaactatcgactacgtagtaactaagattcct
cgttttaactttgagaaatttgccggtgctaacgaccgtctaacgacacaaatgaagtca
gttggtgaggtgatggctatcggccgtaaccagcaagaatctctacaaaaagcgcttcgc
ggcctagaagttggcgcgactggctttgacgaaatggttgacctagatgcaccagatgca
ctgacgaaaatccgtcatgagctgaaagaagctggcgcagagcgtatttggtacatcgcg
gatgcattccgtgcgggaatgtcagtcgatggcgtattcaacctaacgcaaatcgaccgt
tggttcctcgttcaaatcgaagacatcgttaaacttgagcaagagctgaaagcgaaaggt
tttgctggtctaaacaaagacgagttaatcaagcttaaacgcaaaggttttgcggatgcg
cgcctatctaagattctcggtgttgcggaaagtgaaatccgtcgtttacgtgaccaatat
gacatccacccagtctacaagcgcgtagatacttgtgccgctgagttctcatctgatacg
gcttacatgtactcatcttacgatgaggagtgtgaagcgaacccatcagacaaagacaag
attatgatccttggtggcggtccaaaccgtatcggccaaggtattgaatttgactactgt
tgtgtacatgcatcactagcactacgtgaagatggttacgagacgatcatggttaactgt
aaccctgagaccgtttcaaccgactacgacacatctgatcgtctgtactttgaaccagta
actctggaagacgtactagcgattgctcgagtagagaagccaaaaggcgttatcgttcag
tacggtggtcagactccgcttaaattagcgcgtgcacttgaagcggctggtgtgcctatc
attggtactagcccggatgcaatcgaccgtgcagaagaccgtgagcgtttccaagttgcg
gttgaccgtttaggtcttctacagccacaaaacgcgacggtaacgacgatggaacaagcg
gttgagaagtcacgtgaaatcggcttccctcttgttgttcgcccatcatatgtacttggt
ggtcgtgcgatggaaatcgtatacgatgagcaagacctacgtcgctacttcaatgaagca
gttagcgtatcgaacgaatctccggttcttcttgatagctttctagatgacgctgttgaa
gtagacgtagatgcgatttgtgatggtgagcgcgttgttatcggcggtatcatggagcac
atcgagcaagcgggtgttcactctggtgactcagcatgttcgcttcctgcatacactcta
agccaagaaatccaagacgtaatgcgcgagcaagttgaaaagctagcgttcgagttgggt
gttcgtggtctaatgaacacgcagtttgctgttaagaacaaccaagtgtacctaatcgag
gttaaccctcgtgcagcacgtacggtaccgttcgtatctaaagccactggcgcgccaatc
gctaagattgcagctcgtgtaatggcgggtcaatcgttagagtctcaaggctttacgaaa
gaaatcatcccaccttactactcagtgaaagaagtcgtactgccattcaacaaattccct
ggtgttgacccactgttaggcccagaaatgcgctctacaggtgaagttatgggtgttggt
accacattcgcagaagcttatgcgaaagctgaacttggctgtggcaatgtataccctgaa
ggtggtcgtgcacttctttctgttcgtgaaggcgacaaagagcgtgttgttgacctagct
tctaagctatctaagcttggttaccagctagacgcaactcacggcacggcggttatcctt
ggcgaagcgggtattaacccacgtctggtaaacaaggtacacgaaggtcgtcctcacatt
cttgaccgtatcaagaacaacgagtacacctacatcgtgaacaccgcggctggtcgtcaa
gcgattgaagactctaaagtacttcgtcgtggcgcgcttgctgagaaagtgaactacacc
acgacgctaaacgctgcatttgcaacatgtatggcacataccgccgatgcgaaaagctct
gtaacctctgttcaagagttgcacgcgaaagtgaaagcgagcttagaagcttaa
DBGET
integrated database retrieval system
