KEGG   Vibrio alfacsensis: D1115_13255
Entry
D1115_13255       CDS       T05841                                 
Name
(GenBank) AAA family ATPase
  KO
K02450  general secretion pathway protein A
Organism
vaf  Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:vaf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaf02044]
    D1115_13255
Secretion system [BR:vaf02044]
 Type II secretion system
  General secretion pathway protein
   D1115_13255
SSDB
Motif
Pfam: GspA_C39-like AAA_22 AAA_16 PG_binding_1 AAA_30 AAA_19 AAA_5 AAA TniB TsaE SLFN-g3_helicase AAA_14 DEAD AAA_7 ResIII TrwB_AAD_bind PG_binding_3 cobW Sigma54_activat AAA_18 ABC_tran PIF1 NTPase_1 nSTAND3 NPHP3_N AAA_11 AAA_24 AAA_25 COX4
Other DBs
NCBI-ProteinID: AXY01963
LinkDB
Position
I:complement(2732594..2734243)
AA seq 549 aa
MYKDFFGFVELPFSIVPNSRYLYLSQRHKEAITHLQAGLGDGGGFAMLTGEVGTGKTTVA
KAMLANLNENTKAGLILNPTFSSRDLLEAICDEFRVAYPQDATLKQLNQAIHGYLLDNHK
LGWQTLLVIDEAQHLAADVLEQLRLLTNLETDTRKLLKVLLVGQPELQRLLQTTQLRQLA
QRITGRYHLLPLDEKETADYIAFRLHTAGGDQQLFDRSSTKLIAKYSHGIPRLINLICDK
SLNLSYYKGNRTVDKQTVTQACEEVMQFQAEIYQQDKPNQTFEWPVWGSAAIGVLAAVGI
GWGVTQQLTLKPSLNVQPLNSAQTELQVSSPKVSEHAVIETLIYDQLTNEQRDLLLEQNQ
SSLAINELYQLWGYRASVRDNLCLSEPQSTMRCQRKMATWPQLVQQNRPVVLELNYQGRV
GYVILYAIGDGKVEVLNGSERLRLPTSWLKPLWQGNILELWQAPLKETLRLGMEGPAIAI
LDQLLAQAVNEPAIGTEKFDAALRERVELFQRWQGIRVDGIAGQRTLELLQQGVQPDAPE
LKEITEEQA
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgtataaggactttttcgggtttgttgaactgccattttcgattgttccaaactcgcgt
tatttgtatctaagtcaacgccataaagaggcgattacgcatctgcaggcggggttaggt
gatggcggtggttttgccatgctaacgggcgaagtgggtaccggtaaaaccacggtcgca
aaagcgatgttggcgaatctgaatgagaacactaaggcagggttaatccttaatccaaca
ttttctagccgtgatttacttgaagcgatttgtgatgagttccgtgtggcttacccacaa
gatgcgaccttgaagcaacttaatcaggcgatccatggttacttactcgataatcacaag
ttgggttggcaaaccctattggtgatcgatgaagcccagcatttagccgctgatgtgctt
gagcagttacgactgttaactaatttagagacggacaccagaaagctacttaaggtgtta
ttggttggtcagccagaactgcaaagattgctacaaacgactcagcttcgtcagctcgcg
cagcgtattaccggacgctaccatcttctacctcttgatgagaaagaaactgcggattac
atcgcctttcgtttgcataccgctggtggcgatcagcaactgtttgatcggagttcgact
aagctaattgccaaatacagccatggcatccctcgtttgattaacctgatctgcgataag
tcgcttaacctgagttactacaaaggtaatcgaacggttgataagcagacggtcactcag
gcttgtgaagaagtgatgcagttccaagctgagatctatcagcaggataagccgaatcag
acgtttgaatggccagtctggggctcggccgctattggcgtcttagccgctgttggcatt
ggatggggggttacgcagcaactgacgttaaagccatcattgaatgttcagccgctcaat
tccgcgcaaacagagcttcaggtgagctcaccaaaagtgagcgagcatgccgtgattgag
acgctaatttacgatcagctaacgaacgaacagcgtgatttattgttggaacaaaaccaa
tcgagtctcgcgattaatgagctttatcagctttggggttatcgtgcatcggtgcgtgac
aatttatgtttgtcggagccgcaatcgacgatgcgttgccaacgtaaaatggcaacgtgg
ccacaattggtgcagcaaaatcgccctgtggtgttggagctcaattaccaaggtcgggta
ggctatgtgattttgtacgcgattggtgacggcaaagttgaagtgcttaatggcagcgag
cgcttgcgtttaccgacttcatggctaaaacctctgtggcaaggcaatattcttgagttg
tggcaagcaccactcaaagagacgcttcgcttaggtatggaggggcctgctattgcaatt
cttgatcaactcttagcacaggctgtcaatgagccagcgattggaactgaaaagttcgat
gcagcccttcgtgagcgtgttgagctgtttcagcgttggcaaggtattcgcgtggatggc
attgctggtcaacgcactttggagctgttacagcaaggcgttcaacctgacgcgccagag
ttaaaagaaattacagaggagcaggcataa

DBGET integrated database retrieval system