Vibrio alfacsensis: D1115_13355
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Entry
D1115_13355 CDS
T05841
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_13355
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
Other families
D1115_13355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_11
HTH_36
HTH_24
HTH_46
HTH_7
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AXY01978
LinkDB
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Position
I:complement(2753886..2754695)
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AA seq
269 aa
AA seq
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MSDLVTKLMDFGFTKTDALVYINLLKNGRASGYKIAKEISLSRSSVYSSIDNLYNNGYIF
LSDGDTKEYEAKSPELIFNQIEKKTVENIGILKKELSKMMLQEEKEFVYNLTGYENSVQK
AKELINQAEVEIYMNADFRLDEYHDEICNAIERGVRIIGFSFNRIEKPHEKMEFFSRSDE
LETLYPSHRFMLVVDMAQALIFSHRDETKGLYTNNRLMVKMTAEHIHNDIYLTEFHKNSQ
LEAIRINTIHEQTNDMVMDDQKLTKNKKA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggatctagtgactaagttaatggattttgggttcaccaaaacagatgctcttgtg
tacattaacctgctaaaaaatggtcgagcgagcggttacaaaatcgctaaagagatctct
ttatctcgctcgtctgtctactcgtcgatcgataacctgtacaacaacgggtacatcttc
ctttcagacggagacaccaaagagtacgaagcgaaatcaccagagctgatctttaatcag
atcgagaaaaagacggttgagaacatcggcatcttgaagaaagagctgtcgaagatgatg
ctgcaagaagagaaagaattcgtctacaacctcacgggctatgagaactcagttcaaaaa
gcgaaagagctgatcaatcaagccgaagtcgagatttacatgaatgccgacttccgcctt
gatgaataccatgacgagatttgcaacgccattgaacgcggtgtgcgcattattggattc
tctttcaaccgcattgaaaagccgcacgaaaaaatggagttcttctctcgcagtgacgag
ctagaaaccctatacccatcgcaccgatttatgctggtggtggatatggctcaggcgctg
attttctcgcaccgtgatgaaaccaaagggctttataccaataatcgcttaatggtcaaa
atgaccgctgagcatattcataatgatatttatctcaccgaatttcataagaactctcag
cttgaagctatccgtatcaatactattcatgagcaaaccaacgacatggtaatggatgac
caaaagctgactaaaaacaaaaaggcgtag
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