Vibrio alfacsensis: D1115_14340
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Entry
D1115_14340 CDS
T05841
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_14340 (slmA)
03036 Chromosome and associated proteins [BR:
vaf03036
]
D1115_14340 (slmA)
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
D1115_14340 (slmA)
Chromosome and associated proteins [BR:
vaf03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
D1115_14340 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_15
TetR_C_4
TetR_C_24
HTH_AsnC-type
TPR_22
HTH_24
TetR_C_37
HTH_11
TetR_C_13_2
HTH_10
TetR_C_5-like
DUF6262
BALF1
TetR_C_6
GCP_C_terminal
HTH_7
TetR
Motif
Other DBs
NCBI-ProteinID:
AXY02425
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All DBs
Position
I:2937637..2938170
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AA seq
177 aa
AA seq
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MLESTEGASRITTAKLAKQVGVSEAALYRHFPSKARMFEGLIEFIEEALMTRINRILDDE
KDTLERIRMVMHLILAFSERNPGLTRILSGHALMFENERLRERINQLFERIETQLRQILR
ERKIREGKSFPVEERILAAQILGQVEGSLNRFVRSDFKYQPTANFDEYWALLSAQIK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatctacagagggcgcttcacgcattactacggcaaaactggcaaaacaagtc
ggcgtctcagaagccgcgttatatcgccactttccaagtaaagctcgcatgtttgagggc
ttgattgagtttattgaagaagctttgatgactcgaatcaaccgaattttagacgatgag
aaagacacattagagcgaattcgtatggtaatgcacctgatccttgcattctcagaacgt
aacccaggcctgacacgtattctttctggccatgctttaatgtttgaaaatgaacgccta
cgtgaacgaattaaccaattgttcgaacgtattgaaactcaactgcgtcagatcctacgt
gaacgtaagatccgtgagggcaaatcttttccggttgaggagcgtattctagccgctcag
atccttggacaagttgaaggtagtttaaaccgcttcgttcgcagcgactttaagtaccaa
cctaccgctaactttgatgagtactgggctctccttagcgcacaaatcaagtag
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