Vibrio alfacsensis: D1115_14920
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Entry
D1115_14920 CDS
T05841
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D1115_14920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_14920
Transporters [BR:
vaf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D1115_14920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NTP_transf_5
XylR_N
Motif
Other DBs
NCBI-ProteinID:
AXY02243
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All DBs
Position
I:complement(3066511..3068064)
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AA seq
517 aa
AA seq
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MKTMKSKLAVALMAAGLSFNAMAAEIKVGYASDPVSLDPHEQLSGGTLQFSHMVFDPLVR
FTQEMDFEPRLAESWERVNDTTVRFKLREGVKFHSGNDLTADDVVWTFERLQNSPDFKAI
FDPYEKIVKVDDYTFDLVTKGPYPLVLQTATYIFPMDSKFYSGQTADGKDKSELVKHGNS
FASTNVSGTGPFIVTSREQGVKVEFERFKDYWDKASKGNVDKLTLVPIKEDATRVAALLS
GGVDMIHPVAPNDHKRVKDAEGIDLVTLPGTRIITFQMNQNSNEALKDVRVRQAIVHAIN
NEGIVKKIMKGFATAAGQQSPVGYVGHDDKLVPRYDLKKAKQLMKEAGYENGFTLTMMAP
NNRYVNDAKVAQAAAAMLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHSDTEDSAN
FNEFLTMTRNEETGRGQYNCGYYSNPEMDKVVEAANVETDPAKRAEMLKGVEATLYNDAA
FVPLHWQSEAWGAKSNVKAADIVNPMVMPYFGDLVVE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatgaaaagcaaattagcagtggcgctaatggctgcgggcttgagctttaat
gcgatggcagcagaaatcaaagtgggctacgcctccgatccggtgtctcttgacccgcat
gagcagctatctggcggtacgctacagttttctcacatggtatttgacccactggttcgt
tttactcaagagatggactttgagcctcgtctagcggaaagctgggagcgcgttaacgat
acaacggtccgctttaagctacgtgagggcgtaaagtttcattctggtaatgacttaacg
gctgacgatgtggtgtggactttcgagcgtctacaaaactctccagactttaaagctatc
tttgacccatacgaaaaaatcgtaaaagtggacgattacacgtttgatcttgtgactaag
gggccatacccactcgtgctacaaacggcaacgtacatcttcccaatggacagcaagttc
tactcaggtcaaaccgctgacggcaaagacaagtctgagctcgtgaagcacggtaactca
tttgcatcgacgaacgtttctggtacgggaccattcattgtgacgtctcgtgagcagggc
gtaaaagtggagttcgaacgctttaaagattactgggataaagcgtcgaaaggtaacgtt
gataagctaacgttagttcctatcaaagaagatgcgactcgtgtagcagcactgctttct
ggcggcgttgacatgattcacccagtagcgccaaacgatcacaaacgtgtgaaagacgca
gagggtatcgatcttgtgacgctaccaggtacgcgtatcatcacattccaaatgaaccaa
aacagtaacgaagcactgaaagacgtgcgcgttcgtcaggcgattgttcacgctatcaat
aacgaaggtatcgtgaagaaaatcatgaaaggcttcgcaacggcggctggtcaacaaagc
ccagtcggttacgtaggtcatgatgacaaattggttcctcgctacgatctgaaaaaagct
aaacagctaatgaaagaagcaggctacgagaacggctttacgctgacgatgatggcgcca
aacaaccgttacgtgaacgatgcgaaagtcgcacaagcggcggcggcaatgctgtctaag
atcggcatcaaagtggatctgaagacgatgcctaaagcgcaatactggcctgagttcgac
aagtgtgcggcagacatgctgatgatcggttggcactcagatacagaagattcggcgaac
ttcaacgagttcctaaccatgactcgtaacgaagagacaggtcgtggtcagtacaactgt
ggttactactcaaacccagaaatggacaaagtggttgaagcggcgaacgtagaaacggat
ccagcgaaacgtgcagaaatgctgaaaggcgtagaagcaacactatacaacgacgctgca
ttcgtaccgctacactggcaaagtgaagcgtggggtgcgaagtctaacgtgaaagcggca
gacattgttaacccaatggtaatgccttacttcggtgatctagtggttgaataa
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