KEGG   Vibrio alfacsensis: D1115_14970
Entry
D1115_14970       CDS       T05841                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vaf  Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:vaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vaf03400]
    D1115_14970
Enzymes [BR:vaf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D1115_14970
DNA repair and recombination proteins [BR:vaf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D1115_14970
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 SDE2_2C
Other DBs
NCBI-ProteinID: AXY02246
LinkDB
Position
I:complement(3073034..3075049)
AA seq 671 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAS
REMKERVGQTLGKAEAKGLMVSTFHTLGLNIIKREYKHLGLKSGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRQLLSSISNWKNDMLSPEQVKAFAKGEQQQLFAFCFEMYQKQMKAYNA
LDFDDLILMPVLLLRHNEEVRQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLAKNEEHEAERVTGELIAHKFLNRTNYKDYAVLYRGNHQSRLIEK
SLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEK
LGSYANMRGKSLFESSFELGLEHHLTGRGLENLRRFTQWLVAIADQAERGDTVEAVRSLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRD
MMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEANKQPVTQEERMAKGQA
HIANLRAMFKK
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgaagctgaaccctagacaagatgaagccgttaaatatgtatcaggcccatgcttggtg
ctggctggtgctggttcgggtaagactcgcgtaattaccaataaaattgcttacttggtt
cagcagtgtggctataaagcacggaatattgcagcggttacttttactaacaaagcatca
cgtgagatgaaagaacgtgtaggacaaacgttaggaaaggcggaagcaaaaggtttgatg
gtgtcaactttccatacgttagggttgaacattatcaaacgtgaatacaagcacttgggg
ttgaagtccggcttttcgttgtttgatgatcaagaccagttagcactcttgaaagaactg
acagaaaaacaattggatggcgataaggacttattgcgccagttgcttagcagtatctct
aactggaaaaatgacatgttgtctcctgagcaggtcaaagcatttgcaaaaggtgaacag
caacaattgtttgcgttctgctttgagatgtatcagaagcagatgaaagcgtacaacgca
ttggattttgatgatctgattttgatgcctgtccttttattgcgtcacaatgaagaagtg
cgtcaacgttggcagaatcgcattcgttacttgttggttgatgaataccaagataccaat
accagtcagtatgaattggtgaaattgttggttggcgagcgtggtcgtttgactgtagta
ggagatgacgaccaatcaatctattcatggcgaggcgcgaagccacaaaatttagtgctg
ctcgggcaagattatccgaatttacgtttgattaaactggaacagaactatcgttcaacc
agtcgtattttgcgcgctgcgaatattttgatcgcaaataacccacacgtgtatgaaaag
tcactgttttcggaaattccagatggtgaaaagctgaaagtattgttggctaagaatgaa
gagcatgaagcggagcgtgttacgggtgagctcattgcgcataaattcttaaatcgcacg
aactacaaagattatgcggtgctttaccgcggtaaccatcagtcacgattgattgaaaaa
tctctgatgcaaaaccgagttccgtacaaactttctggcggtacgtctttctttgcccgt
gctgaaattaaagacatcatggcctatctgcgcgtgttggtgaaccctgatgacgacaat
gcatttttacgtattgtaaatacgcctcgacgtgaaattggtccagttactttggaaaaa
cttggtagctacgccaatatgcgaggtaagagtctatttgaatccagctttgagcttgga
ttagaacaccatcttactggtcgtggcttagagaatttacgtcgctttacccaatggttg
gtggcgattgccgatcaagccgagcgtggggataccgtagaagccgtgcgttcgctcgtt
cgtgatattcattatgaagattggttgtatgagacctctgcaagtccgaaagcagcagaa
atgcgcatgaagaacgtctctgatctttattcttggattgttgctgaccttgagggggac
aattacgatcaagaagagaagacgcttaaagaggtggttcagcgactcactttacgcgac
atgatggagcgtggagaagaagacgaagacagcgatgcggtacagcttatgacattgcat
gcttcgaaaggtttggagttcccttatgtgtacttaattggctcggaggaggggattcta
ccgcatcaaaccagtatcgatgaagataacgtcgaagaagagcgacgactgatgtacgtg
ggaatcactcgtgctcaacgcgagctaacctttactatgtgtaaagagcgtcgccagttt
ggtgagctcatcaagccaacacaaagtcgtttcttagacgagctgccttttgatgatgtg
gaatgggaagcgaacaagcaacctgtaacgcaagaagagcggatggcaaaagggcaagct
catatcgctaacttacgtgccatgttcaagaagtag

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