Vibrio alfacsensis: D1115_15695
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Entry
D1115_15695 CDS
T05841
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1115_15695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_15695
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_15695
Enzymes [BR:
vaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
D1115_15695
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D1115_15695
DNA repair and recombination proteins [BR:
vaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D1115_15695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AXY02504
UniProt:
A0ABN5PGX6
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Position
II:88148..89515
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AA seq
455 aa
AA seq
DB search
MLIHPHTMLTFEQCQKARIARDSRFDGRFYVAVKTTGIFCRPICPANIPKEENVEYFTDK
TQALKAGYRPCLRCRPDSAPGSWAWKGVETTFLRAIKLIDQGALHQQSLVALSERLGITD
RYLRMLFEKYLGMAPKQYAQYQQLMFAKQLLHSSTMSVTEVGFAAGFNSTRRFNDAFQKI
LKLTPSQVRRKEFDGLGRNRIALPYRGELNWQHMLSFYQQRAIEGMERITESAYQRYVLI
DGCKAHFEVTQKDGYLEMGFEIDDVAKLQNLVSGVRRMFDLDADISSIEQHLEYIAPGLV
TTRGIRIPGVWNPWEAGVRAILGQQVSVKAAIGQLNLLAETLSHDQPVRHFPTPEAIANA
DVSFLRMPQSRKETLVRFAQFMLQEPESDPQKWLALKGIGPWTVSYAQLRGQSQPDCFLD
RDLVVKKAMQNYPSLNADTASPWGSYATFHLWNQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcattcatcctcacaccatgctgacctttgaacagtgtcaaaaagcacgaatagct
cgtgatagccgttttgatggtcgtttttatgttgcggtaaaaaccacggggatcttttgt
agaccgatatgcccggcgaatatacccaaggaagaaaatgtcgagtacttcactgataaa
actcaagcgctgaaagctgggtatcgtccgtgtttgcgttgtcgtcctgacagtgctcca
ggctcttgggcgtggaaaggggtggagacgacatttctgcgggcgatcaagttgatcgat
caaggggcgctgcatcagcagtctttggtggcattatcagaacgattagggataactgac
cgctatctacgcatgctgtttgaaaaatacttggggatggcacctaaacaatacgcacag
taccaacaattaatgtttgctaagcaattgttgcattcgagcactatgtcggtgacggaa
gtaggttttgctgctggattcaatagtacgcgccgttttaatgatgcatttcagaaaatc
cttaagttgacgccatcacaagtgcgcagaaaagagtttgatggtctaggaaggaatcgt
attgcgttgccatatcgaggcgaattgaactggcagcatatgctcagcttttatcaacag
agagccatcgaaggaatggagaggattaccgaaagtgcctatcaacgttatgttttgatt
gacggttgtaaagcgcatttcgaggtcacacagaaagatggttatttggagatgggattt
gagattgatgacgtagccaagctacagaatttggtttcgggcgtgcgccgaatgtttgat
cttgatgcggacatttccagtatcgaacagcaccttgagtatattgcaccaggcttggta
acaacgcgaggaatacgcattcccggagtgtggaacccgtgggaagccggagttagggcg
atactcggtcagcaagtttctgttaaagcagcaatcggacaacttaatttattggcagaa
acgctgagccacgatcaaccagtgcgtcatttccctacaccagaggcaattgctaatgcg
gatgttagttttttgcgtatgccgcaaagtcgcaaagagacccttgttcgttttgcgcaa
ttcatgttgcaagaaccagaaagcgatccgcaaaaatggcttgctctaaaaggaattggc
ccatggacggtgagctacgcacagctgcgaggccaatctcaaccagactgttttttagat
agagatctcgtcgttaagaaagcgatgcaaaactatccgtcattgaatgcggataccgcg
tcaccttggggcagttacgcgacttttcacctatggaatcaatcatga
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