Vibrio alfacsensis: D1115_17090
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Entry
D1115_17090 CDS
T05841
Name
(GenBank) hypothetical protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
D1115_17090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_17090
03036 Chromosome and associated proteins [BR:
vaf03036
]
D1115_17090
03400 DNA repair and recombination proteins [BR:
vaf03400
]
D1115_17090
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
Other families
D1115_17090
Chromosome and associated proteins [BR:
vaf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D1115_17090
DNA repair and recombination proteins [BR:
vaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
D1115_17090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_1
5_nucleotid
Motif
Other DBs
NCBI-ProteinID:
AXY02727
UniProt:
A0A347UV48
LinkDB
All DBs
Position
II:complement(398318..398572)
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AA seq
84 aa
AA seq
DB search
MNNHLSPIDKNHLKKLLRLELDPTWSDSLSATPDMSWVTPIVLETLFTELMIHTRGNQTK
AAKMLGINRGNLSSKIKRISNREL
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccatttatccccaatcgacaaaaatcatttgaagaaactacttcgcttagag
ttagatccgacatggtctgatagtctgtcggcaacacctgatatgtcttgggttacgccc
atagtgttagaaacactatttactgagttgatgatccacacccgaggcaatcaaacaaag
gctgcaaaaatgcttggtattaacagaggaaatttaagctcaaaaatcaaacggatatca
aatcgagagctatga
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