KEGG   Vibrio alfacsensis: D1115_17585
Entry
D1115_17585       CDS       T05841                                 
Name
(GenBank) PAS domain-containing protein
  KO
K03776  aerotaxis receptor
Organism
vaf  Vibrio alfacsensis
Pathway
vaf02020  Two-component system
vaf02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:vaf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D1115_17585
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    D1115_17585
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vaf02035]
    D1115_17585
Bacterial motility proteins [BR:vaf02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    D1115_17585
SSDB
Motif
Pfam: MCPsignal PAS_3 PAS_9 PAS PAS_4 Clusterin PAS_8 LSU HicB_lk_antitox PAS_13
Other DBs
NCBI-ProteinID: AXY02811
UniProt: A0ABN5PJJ9
LinkDB
Position
II:529612..531174
AA seq 520 aa
MSAKISNLAQEVLVGEKDQLVTTTNLNGVITYCNETFCRIAEYSSQELMGQNHNIVRHSD
MPKEAFADMWSKLKQGKAWRGLVKNRTKSGGYYWVDAYVTPIYDDSKIIGYQSVRVKPKR
EWVDIATVTYQSLKKQEHSGKKWSFNSNNTLRYIALVVAVLSPVISIALSLGGPLAWVAS
VLPASILGLLFRQELVTTPREFQKLQQNYDSVSRVIYSGSKRFSIADFHIKMLSARIRTV
LGRMTDSVIPLQVCADELSSTTAEVSSALTQQNKDIHRVRDAAESMESSANEVSASTDDA
HQLIDETMKSCLVAKKTMDQTHSNLAQLSEQAEKAQVTTYQLSDQAQQVGQLMEEIDGIA
AQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSGRTSSVTEQIQTSIDAMLTAIQMWQ
KDIIANKEQTDTCSQVAEQSAQRLFEVENMMQAMSDLMVNVADSARKQRQLSGDVSQYIH
SIASTAEENLAATHSVEQSSELLKQQVRNFHRLANQFEEK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgtcagcgaaaatttcaaatctagctcaagaagtgctggtcggtgaaaaagatcagctt
gtgacaacgacaaatctcaatggggtcattacttattgtaatgaaacattttgtcgtatt
gcagaatactcctcacaagaattgatgggacagaaccataatatcgtgcgtcatagtgac
atgccaaaagaggcatttgctgatatgtggtcaaagttaaagcaaggtaaagcgtggcgc
gggttggttaaaaacagaactaaatccggtgggtattactgggtcgatgcttatgttact
ccgatatatgatgatagtaagataatcggctatcaatcagtgagagtgaagccaaagcgt
gaatgggtggatattgctacggttacatatcagagtttgaaaaaacaagagcattcaggg
aagaaatggtcttttaactcaaacaatactctgcgatatattgctcttgtggtcgccgtc
ctgtctccggttatttccatagcattatcactaggcgggccactggcgtgggtggcaagc
gtgctgccagccagtatattaggattgttgtttcgtcaagagctggtaacaaccccccga
gaattccaaaaactacaacaaaattatgatagcgtaagtcgtgtcatttactcaggaagc
aagcgcttttcaattgcagactttcatataaaaatgctgtccgctcgaattcgaacggtt
ttaggtcgaatgacggattctgtcataccattgcaagtttgtgccgatgagctgagcagt
actacggctgaagtatcctcagcgttgactcaacagaataaggatatacatcgggttaga
gacgctgcagagtcgatggaatcttcagcgaatgaagtgtcggcaagtacagatgatgct
catcaattgattgacgaaacaatgaaatcctgtctggtagcgaaaaagacgatggatcag
acgcacagtaatctcgcacaattgagtgagcaagctgaaaaagcgcaagtgaccacttat
caattgagtgaccaagcccagcaagttggtcagctaatggaagaaattgatggtatcgcg
gcacaaactaatttattagcattgaatgcagcgatagaagcggcgagagcgggtgaacaa
ggccgtgggtttgctgtagttgctgatgaagtccgggcattgtctggccgaacttctagc
gttaccgaacagatccagacttctattgatgcgatgctaacagccatacaaatgtggcag
aaagacatcatcgcaaataaagaacaaacggacacgtgttcacaagttgcagaacaaagt
gcgcagcgtttgtttgaggttgagaatatgatgcaagctatgagtgatcttatggtgaat
gtcgctgattcagcccgcaagcagcgccaactctccggtgatgtgagtcaatatatccat
tcaattgcttctactgccgaagagaaccttgcggcaacgcattctgtcgagcaaagcagt
gaattacttaagcagcaagtgcgaaactttcatcgactagcgaatcagtttgaagagaag
tga

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