Vibrio alfacsensis: D1115_17760
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Entry
D1115_17760 CDS
T05841
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
vaf
Vibrio alfacsensis
Pathway
vaf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D1115_17760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_17760
Transporters [BR:
vaf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
D1115_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AXY02841
LinkDB
All DBs
Position
II:573928..574866
Genome browser
AA seq
312 aa
AA seq
DB search
MSTMTKIFSSIALSAVATGAYANQCETVRFADVGWTDITATTAVTSELLKGLGYKTKTDL
LSVPVTYSSMANGDIDVFLGNWMPTMEGDIAKYREAGTVETVRANLEGAKYTLAVPKYVY
DAGVKSFADLAKHADKFKDRIYGIEPGNDGNRLIQDMIDSDAFGLKDFSLVESSEAGMVS
QVSRAVRRNQWIVYLGWAPHPMNSNVEMEYLSGGDDFFGPNYGGANVYTNVRQDYLSECQ
NVGQLLKNLEFSLEMENQLMEAILNQKQKPAKAAQEWLNANPQQFEAWLEDVKTLDGKDA
KQAITSYLKTNA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgatgacaaaaatcttttcatctatcgcgctgagtgcagtggcgacaggtgct
tatgctaaccaatgtgaaaccgttcgatttgctgatgtaggctggacggacattactgca
actactgctgttacctctgagctgctaaaaggcttgggctacaaaaccaagaccgatctt
ctgtctgtacctgtgacgtactcttcaatggcaaacggcgacattgacgtgttcctaggt
aactggatgccaaccatggaaggcgatatcgccaaatatcgtgaagctggcacagtggaa
accgttcgcgcaaatctagagggcgcgaaatacaccctagccgtaccaaagtatgtgtac
gacgcgggtgtgaaaagctttgctgacttggcaaagcatgccgacaaatttaaagaccgc
atctatggcattgagccgggtaacgatggcaaccgtttgatccaagatatgatcgacagc
gatgcattcggtttgaaagactttagcctagtggaatccagcgaagcaggcatggtgtct
caggtgtctcgtgcagtgcgtcgtaaccaatggatcgtttacctaggttgggctccgcac
ccaatgaacagcaatgttgagatggaatacctatctggcggtgacgacttctttggtcct
aactatggtggtgcaaatgtttacaccaacgtgcgccaagattacctatctgagtgtcaa
aacgtggggcaactgcttaagaacctagagttcagcctagaaatggaaaaccagctgatg
gaagcgattctgaaccaaaaacaaaagccagcgaaagcggcgcaagaatggttgaatgcc
aacccacaacaatttgaggcgtggctagaagacgtgaagacgttagacggcaaagacgca
aaacaagcgattacttcttacctaaaaacaaacgcttaa
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