Vibrio alfacsensis: D1115_20205
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Entry
D1115_20205 CDS
T05841
Name
(GenBank) cell division protein DedD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00240
Pyrimidine metabolism
vaf01100
Metabolic pathways
vaf01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
D1115_20205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vaf02044
]
D1115_20205
Enzymes [BR:
vaf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
D1115_20205
Secretion system [BR:
vaf02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
D1115_20205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AXY03216
LinkDB
All DBs
Position
II:1113461..1113919
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AA seq
152 aa
AA seq
DB search
MTSKWAKRFNQMAELVASWSKDPSTQVGAVITKQNRIVSVGFNGYPHGVSDSVDTDEREL
KYLKTLHAEENAILFSKRDLDGCDIWVTHFPCPNCAAKIIQTGISRVHCPEQSEDFLSRW
GDKIQVSQDMFDQAGVEVDWLPIDELKDQNAR
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaaatgggcgaaacgttttaaccaaatggcagaattggttgcgtcttggagc
aaagacccatcaactcaagttggcgcggtaattaccaagcaaaaccgtattgtatctgtt
ggttttaacggttatccacatggcgtatcagacagtgtcgatacagatgagcgcgaactc
aagtacctaaaaacactgcatgcggaagagaacgcgattttgttctcgaagcgtgattta
gatggatgtgatatttgggtaacacattttccatgcccaaactgtgcagccaaaatcatt
caaacgggaatatcaagagtccattgcccagagcaaagtgaagattttttatctcgttgg
ggtgacaaaattcaagttagccaagatatgtttgatcaagcaggtgttgaagtcgattgg
ctaccaattgatgaattgaaagatcaaaacgctcgctag
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