Vibrio alfacsensis: D1115_20990
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Entry
D1115_20990 CDS
T05841
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vaf
Vibrio alfacsensis
Pathway
vaf00630
Glyoxylate and dicarboxylate metabolism
vaf00680
Methane metabolism
vaf01100
Metabolic pathways
vaf01120
Microbial metabolism in diverse environments
vaf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D1115_20990
09102 Energy metabolism
00680 Methane metabolism
D1115_20990
Enzymes [BR:
vaf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
D1115_20990
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4_8
Fer4
Fer4_9
DAO
Fer4_18
Fer4_6
FAD_oxidored
FAD_binding_2
Thi4
NAD_binding_7
Fer4_2
HI0933_like
Fer4_21
FAD_binding_3
Fer4_7
Fer4_16
Fer4_10
Amino_oxidase
GIDA
Fer4_3
AlaDh_PNT_C
Fer4_15
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AXY03347
UniProt:
A0A347UWW8
LinkDB
All DBs
Position
II:complement(1268388..1272626)
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AA seq
1412 aa
AA seq
DB search
MIEIIIDGKYRIVEEGLTLLEAAKVCGVEIPSLCGMNKSNEKVPCDLCVVEVESGGTKRA
CELEVYRGLNVVTQSEQLSEHRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHIAQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDEPIAIRQLKRHAADADLSAHEA
YVPEKKPSKGLNIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPKAGGWLRYGIPEYRLPK
DILDKEIELMCRNGMQVHTNQKLGVDFTLSQLSEEYDAVCLAVGASQAVEMHYTGSDLEG
CYLGVDYLKDYVTEQNYVTGQKVAVIGGGNTAIDCARTARRAGADTTLIYRRTRDEMPAE
DYEIVEAEHEGVKFHFLTNPAENLADENGRVNAIRLERMALGEPDASGRRSPKPTGEFFT
EEFDTVIAAVSQKPDLSFLDGEDLSIPLTRWNTSDADEKTMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRVAAKAIDLFLNGDMADMPKAAFNSRKEKKLSQVDPLHFENIQKVARSIMPE
LTPAQREQSFAEVELGFDNEEAMKEAARCLECGCQANTDCALRDYSTEYEAEQNFDFALQ
IKSHQDWLDLRAKDLRHKYKVDRSSEFIEFDANRCISCGQCIQACRDKAVHGVLNFVCDK
QGRPALRPDDRPHFGTNKNGLTLMGDSNCVQCGACVQVCPTGAMVDSRDRSQGRTEDLKA
VDTICTYCGVGCKLTMFVDETTNTIRYVKGGDSPVNQGMLCVKGRFGFDFIGSEERLTTP
LIRKDGWLQPASWEEAIQLIASKFSGIKQDFGSNALAGFSSAKTTNEDNYAFQKFVRREL
GTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTTSAHPIIASHI
KQAIRHHGARLIVADPKRIDMAEHAELYMAHRPGTDVMLLNGVMQQIIKNGWYDQEYIEE
RVDGFDTLLQEVMSPAYNLDKVELVTGVKAEDIQAMARMIGTADRTAVYYSMGITQHTTG
HDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNCYPGYQKVYNPIVRQK
FAIEWNAPNLPSEHGLTLTEIIDAACHRDVRGLYIMGENPVLSDPNQAHVIEGLETLDFL
VVQDIFLTETAQYADVVLPSCSFAEKAGHFTNTERRVQRVNPVVSAPGEAKEDWWIIQEI
ANAMGSDWDYHCVSDITNEIARVTPQYAGLLWDTITPNGVQWPSNKNNPNGTRIMHQTQF
TRGKGQMVGVPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTKGLDNLAGPRAMVSV
EDAEALGISNGQRLKVSTRRGSIEIDAFVTKRIQKGVVFIPFHFVESPVNRLTTTATDPH
AKIPEFKVAAVKLEVLSAVETNGFVADCLPVN
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgatagagattatcatcgatggaaaatatagaattgtagaagagggtctaaccctttta
gaagcagcaaaagtgtgtggggtcgagatcccatcgctgtgcggaatgaacaaaagtaat
gaaaaagtaccctgtgacttgtgtgtggttgaagtcgaaagcggcggtactaagcgtgcg
tgtgaactcgaagtttaccgcggcctgaatgtggttacgcaatcagaacaattaagcgag
caccgcagaaaagcactcaaccgtatcatgacggaccattacgccgattgtgaagcgcca
tgtaaaactgcgtgtcctgcgggtgtagatatccaatcgtacctttatcacatcgcacag
aacgatcatcaaaaagcgattgaagtgatcaagcgtacgcttccaatgccactatcgatt
ggtcgtgtttgcccggcattttgtgagagcgaatgtcgccgctcgttagtcgatgagcct
attgcaattcgtcagctaaaacgtcatgccgcggatgctgatttgtctgcgcatgaagcc
tacgtaccagaaaagaaaccaagcaaaggtttgaacattgccgtcgtcggcagtggccct
ggtggtctaacggctggctactacttatcgaacgaaggctacgacgttacggtctttgaa
tccatgccaaaagcgggcggttggttgcgttatggcatcccagaataccgtttgccaaaa
gacattctagataaagaaatcgaactgatgtgccgcaatggcatgcaagttcacaccaat
caaaagctgggtgtggatttcaccctttctcaattgagtgaagaatacgacgcggtgtgt
ttggcggtcggcgcgtctcaagcggtcgaaatgcattacacaggcagtgaccttgaaggt
tgctacttaggcgttgattacctaaaagattacgttaccgagcaaaactatgtaacgggt
cagaaagtcgcggtgatcggtggtggtaacacggcaattgactgtgctcgtactgcgcgt
cgcgctggtgcagacaccacattgatttaccgtcgtactcgtgacgaaatgccagcggaa
gactacgaaattgtcgaagcggaacacgagggggtgaaattccacttcttgaccaaccct
gcagaaaaccttgccgatgaaaacggacgcgtgaatgcgattcgtctagagcggatggcg
ttgggtgagccggatgcttctggtcgtcgaagccctaaaccaaccggcgagttctttacc
gaagagttcgacaccgtgattgcggcagtctcgcaaaagcctgatttgagcttcctcgat
ggcgaagatttgtcgattccgctaacgcgttggaacacctccgatgcagatgaaaagacc
atgcacactggcacgggcaacatcttcagtattggtgatttccgccgtggtcccgcaacg
gcagttgaagccgtgggtgatggtcgtgttgccgcaaaagccattgatctgtttttgaat
ggtgatatggccgatatgccaaaggcggcgttcaactcgcgcaaagagaagaagctctct
caagtcgatccgcttcatttcgagaacatccaaaaagtcgctcgttctatcatgcctgag
ctgactccagcacaacgcgagcaaagcttcgctgaagtggagttgggttttgataacgaa
gaagcaatgaaggaagccgcgcgctgtctggaatgtggctgtcaggcaaataccgattgt
gcgctgcgtgattactccaccgaatatgaagctgagcaaaactttgacttcgccttgcag
attaaatcgcatcaagattggttagatcttcgtgcgaaagatttgcgtcataagtacaaa
gttgaccgcagttctgagtttattgagtttgatgccaaccgctgtattagttgtggtcaa
tgcatccaagcgtgtcgtgacaaagccgtgcacggtgtactgaactttgtgtgcgacaaa
caaggtcgtccagcattacgtcctgacgatcgtccacattttggaactaacaagaatggt
ttaactctgatgggcgattcgaactgcgtgcaatgtggtgcgtgtgttcaagtatgtcca
acgggtgcgatggtcgatagtcgtgaccgttcgcaaggtcgcactgaagatctgaaagcg
gtcgacaccatttgtacatactgtggtgtgggttgtaagttgactatgttcgtggacgag
acaaccaatacgattcgttacgtgaaaggcggtgactcgccggtgaaccaaggcatgctg
tgtgtgaaagggcgctttggttttgatttcattggcagtgaagagcgtcttaccacgcca
ttgatccgcaaagacggttggttgcagcctgcaagttgggaagaggcgattcaactgatt
gcaagcaagttctctggcatcaagcaagattttggcagcaacgcattagcgggtttctct
tcagcgaaaaccaccaatgaagacaactacgcgttccaaaaatttgtccgtcgtgaactg
ggcaccaataacgtcgatcactgtgcgcgtttgtgtcacgcatcgagtgtaaccggtctt
gaggcatcactcggtagtggtgcaatgaccaacgacattccaagtattaagcactcggat
gtgatctttattatcggttcggatactacatcggcacacccgatcatcgcttcacatatc
aaacaagcaattcgtcaccatggtgcacgtttgattgtggctgacccgaaacgtatcgat
atggcagagcatgcagagctttacatggcgcaccgtccgggtacggatgtgatgctccta
aacggtgtcatgcagcagatcatcaagaacggttggtacgatcaagaatacatcgaagag
cgtgtcgacggctttgataccttgctgcaagaagtgatgtcgccagcctacaacctcgat
aaagtggaactggtcacaggcgttaaagccgaagacattcaagcaatggcgcgcatgatc
ggtacggcagatcgtacggcggtgtactactcgatgggtatcactcagcacacaacaggt
cacgataacgtacgctcgatcgctaacctgcaattgctgtgtggcaacatcggtattgaa
ggtggtggtattaacccgctgcgtggtcaatcaaacgtgcaaggcgcgtgcgatatgggg
gctttaccaaattgctacccgggctatcaaaaggtgtacaaccctattgtgcgtcagaag
ttcgcgattgaatggaatgcgccaaatctgccgtctgagcatgggttaacgttgactgaa
attatcgatgccgcttgccatcgtgacgttcgcggtctttacatcatgggggaaaaccca
gtgttgagtgatccgaaccaagcacacgtcattgaaggtttggaaacgctcgatttcttg
gtggttcaagacatcttcttaaccgaaactgcgcaatacgcggatgtggttctgccttca
tgctcttttgctgagaaagcgggtcacttcactaacacagaacgacgtgttcagcgtgtg
aaccctgtggttagcgcaccaggtgaagcgaaagaagattggtggatcatccaagagatc
gccaatgccatgggcagtgattgggactaccattgcgtgtctgatatcactaacgaaatc
gcacgagtgacgcctcaatacgcgggtcttctttgggataccattacgccaaacggtgtg
caatggccaagcaacaaaaataacccaaatggcactcgcatcatgcaccaaactcagttt
actcgtggcaaagggcaaatggtgggggtaccgttccgttatgccgctgagctgcccgat
gaagaatatccactcgtgttaacgactggtcgtgtacttgaacagttccacacaggaacc
atgacgcgcaaaaccaaagggttggataacttagctggccctcgtgcgatggtgagtgtg
gaagacgccgaggcgctaggcatcagtaatggtcagcgccttaaagtgtcaacacgtcgt
ggtagcatcgaaattgatgcgtttgtgactaagcgtattcaaaaaggggtggtgtttata
ccattccactttgttgaatcgccagtcaaccgtttaaccaccaccgctacggatccgcat
gcaaagatccctgagttcaaagtcgctgcggtgaaattggaagtgctttcagcggtggaa
acgaacggttttgtagcggactgtttgcccgttaattag
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