Vibrio alfacsensis: D1115_22015
Help
Entry
D1115_22015 CDS
T05841
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaf02000
]
D1115_22015
Transporters [BR:
vaf02000
]
Other transporters
Pores ion channels [TC:
1
]
D1115_22015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
STIL_N
Motif
Other DBs
NCBI-ProteinID:
AXY03523
LinkDB
All DBs
Position
II:complement(1497512..1499542)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKTTPFARKPLAVVIGALCTSFSVFADTALIETDEQLVVTATRTQMELKDAPASISVIT
AEDIENDPGITLADIVSNATSVESDFDSTRAGRQQISIRGMDSKYTLIMVNGRRMSSASA
IVRGNDFDLSAIPMDSIERVEIIRGPMSALYGSDGMGGTINIITKSPSNDWSSQLSLDNT
TPNDGNGGQEYTVGLTTSGALIEDTLFARFSASQTSRNAWQPYSGIKSVKGKEFDRSDVT
ALEGRDSLALFGSLSWHLADNQFIDLDLGYSDDERDTAAESATTVLYSESRVKRNSQALS
HTGMWAWGDTQVRYSRENVENKEAANDGADSIEEVTQIFEASATTYLGDSHTVTFGFDYQ
TSELTNPENIKGGKADAYQGSIFVQDQWEMTDTLMATIGGRLDKHERYGEEFSPRVYLVH
QTTDALVLKGGVGKAFKAPTMTQNHPDFLLSSCKGNCNIVGNADLEAETSINYELSALYS
GRNWNVESAVFRNEIENLIEQTDISCKVGTWSSSKMSCVNEDGSLVDREISDPYKSYQNV
SKAVIQGVELSGNVQLAEAWELSGNYTFLDTEDKSTGEELNERYKHSAFARVNWYATQDL
NLFASARYRGDRKIDSELTQDAYTTMDLGTVYHVNDALRIRAGITNLTDERVSKELENIG
YVEAPRTYYVGMTADF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacaacgccatttgcacgcaaaccattagcagtggtcatcggtgcgctatgt
acttctttttctgtctttgctgatacagcacttatcgaaaccgatgagcagcttgttgta
acagcgactcgtactcaaatggagttgaaagacgctccagcttcgatttcggttatcaca
gcagaagatattgaaaatgacccgggtatcacgttggccgatatcgtatcgaacgcaacc
agcgtggagtcggatttcgatagcactcgtgcgggccgtcaacaaatctcgatccgtggt
atggattcaaaatatacgctgatcatggtgaatggtcgtcgtatgagttcggcaagcgcc
atcgtacgcggtaacgatttcgacctttctgcaatcccaatggattcgattgagcgcgta
gagatcatccgtggtcctatgtcggcactttacggctcagatggtatgggcggcacgatc
aacatcatcactaagtcaccaagcaacgattggagctcgcaactgagcttagacaacacc
acgccaaacgatggcaacggtggtcaagagtatacggttggtttaacgacctctggtgcg
ttgattgaagatacgttattcgctcgattctcggcatcacaaaccagtcgaaacgcgtgg
caaccttactcagggattaagagtgtaaaaggtaaggagtttgatcgctcagatgtgacg
gcgttagagggccgcgatagtttggctttgtttggtagtctttcatggcatcttgctgac
aatcagttcatcgacttggatttaggttacagcgatgatgaacgtgatactgcggcagaa
agtgcaacgacagtgctttattcagaatcgcgtgtaaaacgtaacagtcaggcactttct
catacaggcatgtgggcctggggtgatacgcaagttcgttactcacgtgaaaacgtagag
aacaaagaagccgcaaacgacggcgcagattcgattgaagaagtgactcaaatttttgaa
gcgtctgcaaccacttatcttggtgatagtcataccgtcacattcggttttgactaccaa
acaagtgagttaactaacccagaaaatattaagggtggtaaggctgacgcatatcaaggt
tcgatatttgttcaagaccaatgggaaatgacggatactctaatggcaaccattggtggt
cgcttagataagcatgagcgctatggcgaagagttcagcccgcgtgtatatctagttcat
caaacaacggatgcactagtgctgaaaggtggtgtgggtaaggcatttaaagcgccaacc
atgactcaaaaccacccagatttcttgctgagtagctgtaaaggtaactgtaatattgtt
ggtaacgctgacctagaagcggaaaccagtattaactatgagttatctgccctatacagt
ggccgtaactggaatgttgaaagtgcggtattccgtaacgaaattgaaaacttgattgaa
cagacggacatcagctgtaaagtgggcacttggtcgagcagtaagatgagctgtgtgaac
gaagatggtagtctcgttgatcgtgaaatctcagacccttacaaatcataccaaaacgtg
tctaaagccgtgattcaaggtgtggaattatcgggtaatgttcaacttgctgaagcatgg
gaactgtcgggcaactatacattcttagatactgaagataagtctaccggtgaagagctt
aacgagcgttacaagcactctgcgtttgcacgagtcaactggtatgcgacgcaagatcta
aatctatttgcgagtgctcgatatcgtggcgaccgtaagatcgattctgaactgacacaa
gatgcctacacgacgatggatcttggtacggtttaccatgtgaacgatgcgctacgtatt
cgtgctggtatcacgaacttgaccgatgaacgtgtttcaaaagagcttgagaacattggt
tatgttgaagcgccacgtacttactatgtaggtatgacagcagacttctaa
DBGET
integrated database retrieval system
