Vibrio alfacsensis: D1115_22305
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Entry
D1115_22305 CDS
T05841
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vaf
Vibrio alfacsensis
Brite
KEGG Orthology (KO) [BR:
vaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vaf03000
]
D1115_22305
03036 Chromosome and associated proteins [BR:
vaf03036
]
D1115_22305
Transcription factors [BR:
vaf03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
D1115_22305
Chromosome and associated proteins [BR:
vaf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D1115_22305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_34
DDRGK
HTH_IclR
HTH_27
LexA_DNA_bind
Fe_dep_repress
HTH_11
E3_UFM1_ligase
HTH_5
FliE
DUF7343
HTH_20
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AXY03578
UniProt:
A0ABN5PNP5
LinkDB
All DBs
Position
II:complement(1564642..1565118)
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AA seq
158 aa
AA seq
DB search
MSEQLDRIDLQILRLLHSKGRLPIVELAKHVNLTTSPCSERVKRLEREGYINGYHAEINA
EKLGLDVQVFIHIRLDQTSFSIFEKFAQAVELLPEVEECYSLSGDFDTMIKVRVKSMKAY
QEFMSSKMGTLPGVIQTRSEVVIEEHKTGYGVNPELIS
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaactggataggatagatttacaaatattgcgacttttacactcgaaagga
agactcccaattgttgaattggctaagcacgtcaatttgaccacatccccttgctctgaa
cgtgtgaagaggttggagcgtgaggggtacatcaatggttatcatgctgagataaatgca
gaaaaactgggtttagacgttcaagtgtttatccacattcgccttgatcaaaccagtttc
tctattttcgaaaaatttgctcaagcggtcgaactattgccagaagttgaggagtgttac
tcgctatccggtgattttgacaccatgattaaagttcgtgttaagagtatgaaagcgtat
caagaatttatgtcgagtaagatggggacgctaccgggggtgattcaaactcgcagtgaa
gtcgtcattgaggagcataaaacgggttacggggtgaacccagaattgataagttag
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integrated database retrieval system
