KEGG   Vibrio alginolyticus: N646_0338
Entry
N646_0338         CDS       T02840                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
vag  Vibrio alginolyticus
Pathway
vag03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    N646_0338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vag03400]
    N646_0338
Enzymes [BR:vag01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     N646_0338
DNA repair and recombination proteins [BR:vag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     N646_0338
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     N646_0338
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      N646_0338
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AGV16171
UniProt: A0A2I3BZN6
LinkDB
Position
1:complement(377287..378708)
AA seq 473 aa
MHQDNQPTFFFFDYETWGTNPAKDRPSQFAGVRTDENFNIIGEPLVMYCQPPADYLPSPE
AALITGITPQKTVQEGLSEPEFIAKIHTELARPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQNGNSRWDLLDVLRACHALRPEGVEWPENEDGFTSFKLEHLSVANGIEHSNAHD
AMADVVATIEMAKKVKAAQPKLFDYFFSMRQKRKLNDLVDIVNMTPLMHVSGMLGRECQY
TSWIVPVAWHPTNNNAVITIDLAKDPQPILELSAEELHERLYTKREDLGELLPVPVKLVH
LNKCPILAPAKTLTAENAESIGIDRQQCLANLALLRQHPEIREKLISLFSVERKFDKSDD
VDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKRIKPLLFRYRARNFPGTLDEQ
EQRRWALHCREVFESQIEEYMLNLENLVHEHESDEKKIAILKSVYRYVESLAS
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgcaccaagataatcagcccacttttttcttctttgattatgagacatggggaaccaac
cccgcgaaagatcgcccaagccagtttgctggtgttcgtacagatgaaaactttaatatc
atcggcgagcctttagtcatgtactgtcaaccaccggctgattatcttccgtctcctgaa
gctgcgcttattactggtattactccgcaaaaaacggttcaagaaggcctttctgagcca
gagtttatcgctaagattcacactgaactcgcgagaccaaataccaccagtttaggctac
aacagcattcgctttgatgacgaagtgacccgttatacttgttatcgcaactttatcgat
ccatacgcatggagttggcaaaacggtaactcacgttgggatttactcgatgtactacgc
gcttgccatgcccttcgcccagaaggcgtagaatggccagaaaacgaagatggcttcact
agctttaaattagaacacttgtctgtggctaacggcatagaacatagtaacgcgcacgat
gccatggcagatgtggttgcgactatcgaaatggcaaagaaagtaaaagcagcgcaacca
aaattgtttgattactttttttctatgcgccaaaagcgcaagctcaatgatttagtcgac
atcgtcaacatgacaccgttgatgcacgtttcaggcatgctagggcgcgaatgtcagtac
actagctggattgtgcctgttgcttggcatccaaccaataataacgccgttatcaccatc
gatttagcgaaagaccctcaacctattcttgagctatccgcagaagagctgcacgaaaga
ctctacacgaagcgcgaagatcttggtgaattgctaccagtgccagttaaactagttcat
ttgaacaaatgccctattctcgcccctgcaaaaacgttaacggctgaaaatgcagagtct
attggcattgatcgccaacaatgtctcgccaatctcgctttgttgcgccaacatcctgaa
attagagaaaagctgattagcctcttttccgtcgagcgtaaattcgataaaagtgatgac
gtcgatacacagctttacgacgggttcttttctccggctgatcgcgcagctatggatatc
attcgagaaaccgacccgaataatcttgctgcattagacattgaatttgatgacaagcgt
attaaacctctattgttccgctatcgtgcgcgtaacttcccaggcacattagacgagcaa
gaacaaagacgctgggcactacactgtcgagaagtgtttgaaagccaaattgaagagtac
atgctgaatttagaaaacttagttcacgaacatgaaagtgacgaaaagaagattgcgata
ttaaaatccgtgtaccgttatgtagagagcttagcttcctaa

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