Vibrio alginolyticus: N646_0440
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Entry
N646_0440 CDS
T02840
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vag
Vibrio alginolyticus
Pathway
vag03030
DNA replication
vag03430
Mismatch repair
vag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N646_0440
03430 Mismatch repair
N646_0440
03440 Homologous recombination
N646_0440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vag03032
]
N646_0440
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_0440
Enzymes [BR:
vag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N646_0440
DNA replication proteins [BR:
vag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N646_0440
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N646_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF3487
Motif
Other DBs
NCBI-ProteinID:
AGV16273
UniProt:
A0A2I3C0J0
LinkDB
All DBs
Position
1:481257..482003
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AA seq
248 aa
AA seq
DB search
MWFSKKVEKEQPLLDTSQTPEWSMLFKQLAKEAKDERLKRYYSTPMVNGETPIEQVPFVS
VDFETTGLNSEEDVILTIGLVPFTIDRVQCNGSAHWVVNPNRELNHESVIIHGITDSEVK
NAPQLSQILGEILDALSGKVVLVHYKNIERQFFNNALLNSIGEGIQFPVVDTLDIEYAIQ
RRECRGFINKLKGKKPGSVRLGHARERYGLPAYQPHHALTDALATAELFQAQLQYHFNRN
MPISSVWQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctcaaaaaaagtagaaaaagaacagccgttgttggatacatcccagacgcca
gagtggtcaatgttgttcaaacaactagctaaagaagcgaaagacgagaggctcaaacgc
tactattcgacaccgatggttaatggggaaacaccaattgaacaagtgccatttgtctcg
gtagactttgagacaacaggattgaactcggaagaggatgtcattctcacgatcggactt
gtgccgttcactattgatcgtgttcaatgtaatggttctgctcattgggtcgttaaccca
aacagagagttaaaccacgagtctgtcattattcacggtatcactgactctgaggttaaa
aacgcgccgcagctgtctcagatcttgggtgaaatattggatgcgttgtcaggcaaagtg
gtacttgttcactacaagaacattgaaaggcagttctttaataacgccttgctaaatagc
atcggagaggggatacagtttcctgttgttgatacgttagatattgagtatgcgatacaa
cgccgtgaatgcagaggttttatcaataagttgaaaggcaagaaacccggttctgtacga
ttagggcacgctcgtgaaagatatggcctccctgcttatcaacctcaccatgccctgacg
gatgcgttagcaactgcggagctgtttcaagcacaactgcagtatcactttaatcgaaac
atgccaatatcttcggtttggcaatag
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