Vibrio alginolyticus: N646_0770
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Entry
N646_0770 CDS
T02840
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vag
Vibrio alginolyticus
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vag03000
]
N646_0770
Transcription factors [BR:
vag03000
]
Prokaryotic type
Helix-turn-helix
Other families
N646_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_2
AAA_5
PAS_4
HTH_30
Mg_chelatase
AAA
AAA_3
nSTAND6
MCM
PAS_GdpP
HTH_50
HTH_7
HTH_29
HTH_22
HTH_23
PAS_9
AAA_16
RsgA_GTPase
HTH_11
Diguanyl_cycl_sensor
AAA_19
HTH_Tnp_IS1
HTH_17
DUF2089
Motif
Other DBs
NCBI-ProteinID:
AGV16603
UniProt:
A0A2I3C4U6
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Position
1:858931..860697
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AA seq
588 aa
AA seq
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MELQHISDNNWLSTSWVRSEQAGLKQRRRPEDIRVTPATLQDRRHQLNFLLEAVTQFALP
LFNQLFAHSDSRLILTDSDGVIIGSWGQPRFREKLTEISLSSGACWQEKVKGTNAIGTAL
VEAKPVSVIGDQHFIQHHRFISCSANPIFDHLGNLIGVLDITSEQKRHDFSTQVLVQNMV
QQVENQLLNLIPQGHIRVDLACEKGLLNSGWQGIIIANEDGQVLAHNQVASQLFAQKSII
GQSLDDILSTRGNEHPFVFKTKPLTDKDSKVKSRAVAASNDLHYGDSAVEHCWQQANRVI
DKDISLLILGETGVGKNEFVKALHKNSQRKTGPLVSVNCGALPKDLVESELFGYVAGAFT
GANSKGYQGKIRQAHKGILFLDEIADLPLEAQSRLLHVLQDKTVLPVGSNQSIQVDTQII
AATHKDLEHLVSEGLFRQDLYYRLNGLIIELPRFEEREDKRQLIENIHRRHAESEQQLCP
HLLSLMLSYSWPGNLRELDSLIKVSALMAQGEEILELTHVPAHLSKKLSQAQEGAASAEP
TSELRATVEDKLLKTYQANQGNISKTSRMLGVSRNTIYRKLKSLGILS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcaacatattagcgataacaattggctttcaacttcatgggtcagaagtgaa
caagcgggtttaaaacagcgtcgacgccctgaagatattcgagtaacgccagcaacgctc
caagataggcgtcaccaactcaattttttgctagaggcagtcactcaatttgcgctccct
ttgtttaatcagctatttgctcatagcgacagtcgcttaattttgacggattcagatggt
gtcatcatcggcagttggggacagcctagatttcgtgaaaagttaacggaaatctcgcta
agctctggagcatgctggcaagaaaaggtcaaaggcaccaacgcgattggtacagctttg
gttgaagcaaagcccgtttctgttattggtgatcagcactttatccaacaccatcgtttt
attagctgttcggctaatcctattttcgatcatcttggtaacctcattggcgtattagat
attacaagcgagcaaaagagacatgacttctcaacgcaagtactagtacaaaacatggtc
cagcaagtggagaatcaactacttaacttgattccacaagggcatattcgtgtggattta
gcgtgcgaaaaaggtttactgaatagtggttggcaaggaattatcattgcaaatgaagac
ggacaagttttggctcacaatcaagtagcctctcaactttttgcgcaaaaaagtatcatt
gggcaatccttagacgacattctatccactcggggaaatgagcaccctttcgttttcaaa
acaaaaccgcttaccgataaagatagcaaggtcaagtctcgtgctgtagcggcgtccaat
gatcttcattatggcgactccgctgttgagcactgttggcagcaagctaatcgcgtcatc
gataaagacatcagtttgttgattctcggagagactggtgttggcaaaaacgagtttgta
aaagcactccataaaaacagccagagaaaaacgggaccgttggtttccgttaactgcgga
gctttaccaaaagacttggttgaatctgaattgtttggctacgtagccggtgcctttact
ggcgcaaacagcaaaggctatcagggaaaaattcgccaagcacacaaagggattttgttt
ctggatgaaatcgcagatttacccttggaagctcaaagccgcttgctccatgtattgcaa
gataaaaccgtgcttcccgtgggttcaaaccaaagtattcaagtcgatacgcaaatcatt
gcagccacgcataaagatctggaacatttggtcagcgaaggattgttccgccaagatttg
tattatcgccttaatggcttgatcattgagctacctcgctttgaggagcgtgaagataaa
cgacaactgattgagaacattcatcggcgtcacgccgaatctgaacaacagctttgccct
cacctactttctctgatgctgtcttactcatggccaggaaatttgcgtgaactcgatagt
ttaatcaaagtatccgccttaatggcgcaaggtgaagaaatattggaactcacacacgtc
ccagcccatctaagtaagaaactcagccaagctcaagaaggggctgcatccgctgaacca
acttcagaactgcgtgcaaccgtcgaagataagttactcaaaacatatcaagccaaccag
gggaacattagcaaaacgtctcgtatgcttggtgtgagccgaaataccatttacagaaag
ttgaaaagccttggcatattaagttaa
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