Vibrio alginolyticus: N646_0997
Help
Entry
N646_0997 CDS
T02840
Name
(GenBank) putative amidase
KO
K21470
L,D-transpeptidase YcbB
Organism
vag
Vibrio alginolyticus
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vag01002
]
N646_0997
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vag01011
]
N646_0997
Peptidases and inhibitors [BR:
vag01002
]
Cysteine peptidases
Family C82
N646_0997
Peptidoglycan biosynthesis and degradation proteins [BR:
vag01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
N646_0997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
HPPK
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AGV16830
UniProt:
A0A2I3C6Z5
LinkDB
All DBs
Position
1:complement(1062089..1063651)
Genome browser
AA seq
520 aa
AA seq
DB search
MFARVLIMTALLVPFCSFSTVVSLEASAQVEQEGAVQKLSVEKMIHYPEVIDQLYQSTNY
RLNWENESDIEQFLFQVNLVALADVTDEFENQLHRINQVRWQGDNLDFDLVMTDSLLMYL
SYLEQLPEEGINWLFTDKAHVTLPAPSIDTLSVLSNEITVGKLGQFLASLRSPLQTDDAF
YSAYSSLSEHSQYQYPAYQQTGLARVGDILENRPLLIERMEIVGVDVSYLDLVTEEYDEQ
LELAIKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKERDNVVFVN
VPGYEVTYWHDGQPLFESKVVVGRASRKTPIMSVALDSVILNPTWNVPWTIMVKDIIPKV
KRNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLQNALGLYKFNM
PNPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRESSRR
SNTSVPLGERIQVHIIYQTAWLEEGTLYYRDDIYKYDHRS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgctagggttttaatcatgacggcacttctggtgccgttttgcagcttttccacc
gtcgtttctctcgaagcttcagcgcaagtcgagcaagagggagcggtacaaaagctgtct
gtagaaaaaatgatccattatccagaggtgattgatcaactgtatcaaagcaccaattac
cgtttgaactgggaaaatgaaagtgatattgagcagtttctttttcaagtaaacctggtt
gcacttgcggatgtcaccgatgaattcgaaaatcaacttcaccggataaaccaagtaagg
tggcagggagataatctcgacttcgatttagtgatgacagattcactcttgatgtacctt
agttatcttgagcaactccccgaagaagggattaattggctatttacagacaaagcccat
gttacgttacccgctcctagcatcgatactttatcggttctgagtaatgagattacggtt
ggcaaacttggtcagtttttggcaagtctccggtctccattacaaacagatgatgctttc
tactccgcctattcttcgctatcggaacattctcagtaccaatatcctgcctatcaacaa
actgggctagcacgtgttggcgatatattagaaaacagacccctattgattgagcgaatg
gagatcgtaggcgtagatgtttcttacttggatttagtcactgaagaatatgacgaacaa
ttagagcttgcgataaaagagttccagcgtattcatggtttgaaagaagatggcgttatc
ggcccgaataccattcggtggatcaacttttctcctcaagagcgattgcatctgctggcg
ttgaattctgagcgttcaagaatttggtcgaaagaaagggataatgttgtctttgttaac
gtgcctggatacgaagtcacgtattggcatgacggtcaacccttgtttgagtctaaagtt
gtggtagggagagcatcaagaaaaacacccatcatgtcggtggcattggattcagttatt
ctcaacccaacttggaacgtgccttggactatcatggttaaagacattattcctaaagta
aaacgtaatccgatgtatttgattaaccataacattcaaatcattcggtcttggacttcg
aacgaaattattgaccctacaaccatcaattgggcaacggtgaatccgagaacatttcct
tatcgtatgcgacaggcgtcgggcttacaaaatgcactgggattgtacaagttcaatatg
cctaacccacaagctatttatttgcatgacacgccaagtaagaacttgtttgaacaggac
agacgcgcattcagctcaggatgtgttcgtgtagaacatgcagaccagttagcagaactt
ctgttcaaaactcaggggctggaagaacgtttagcgaaaaagcgagaaagttctcgtcgg
tctaacacgtcagttcctttgggagagcgcattcaagtacacatcatttatcaaacagca
tggttggaagagggaacgctttactaccgtgatgatatctataagtacgatcaccgcagt
tga
DBGET
integrated database retrieval system
