Vibrio alginolyticus: N646_1287
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Entry
N646_1287 CDS
T02840
Name
(GenBank) transcriptional regulator, LysR family
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vag
Vibrio alginolyticus
Pathway
vag05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
N646_1287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vag03000
]
N646_1287
Transcription factors [BR:
vag03000
]
Prokaryotic type
Helix-turn-helix
LysR family
N646_1287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AGV17120
UniProt:
A0A2I3C8C2
LinkDB
All DBs
Position
1:1375418..1376293
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTTAAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNSFMKQYPDI
NIELTTENNADKLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPDYLTSNPAPHHA
EELSNHSLLKGYPLIKWTLINSKGESVVNVDRGRFQANALNVVRSACSEGLGITLMPDVM
IKEYIESGDLVRVLPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgacttaaacctgtttcgactggttgtcgaaaatgggagctacaccgca
acttcgcgaaaaaccatgatcccggttgcgaccatcacccgacgcattcaagcgctagaa
gactctgtcaatcttcgactattgaaccgtcatgctcgcaaactctcgctcactgaagca
ggggaacgtttttaccatgagtgctctcctttactacaaaggctaacaaccgcagcagag
gaaatcactgacgactgccgaggagcatccggcaagattaagatatccgcgccttacaac
ttaactaaacgaatgatgatgccgatgttcaacagctttatgaagcagtacccggacatc
aacattgagctaacgacagagaataatgcggacaagcttgaccctactgaatgggatgta
atttttcgagtgggaccgcaacgcgactctagcctcatcgcgcgtaagattggcgaagtg
aaggatattctcgttgcaagccctgactatctaacctcgaatcctgcgccacaccatgca
gaagagctatctaaccattcattgctaaaagggtacccacttattaagtggaccttgatt
aatagcaaaggcgagtctgtggtgaatgttgatcgtggtcgttttcaagcaaacgcgctc
aatgtggtgcgcagcgcttgttccgaaggtttaggcatcacactaatgccagatgtaatg
atcaaagagtacatcgagagcggcgatttggtacgcgtactgccagattggagtgcaaac
ccgcgcgacatttatatgctttacaaccacaaagaccacctgccagagaaagttcgcctc
tttattgactttgtgatcgcttataacattcactaa
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