Vibrio alginolyticus: N646_1412
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Entry
N646_1412 CDS
T02840
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vag
Vibrio alginolyticus
Pathway
vag03030
DNA replication
vag03430
Mismatch repair
vag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N646_1412
03430 Mismatch repair
N646_1412
03440 Homologous recombination
N646_1412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vag03032
]
N646_1412
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_1412
Enzymes [BR:
vag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N646_1412
DNA replication proteins [BR:
vag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N646_1412
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N646_1412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AGV17245
UniProt:
A0A2I3C8G9
LinkDB
All DBs
Position
1:complement(1496404..1499883)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRVHSDFSMVDGLNKVPPIVKKVAELGMPAMALTDFTNLCGLVKFYGTAHGS
GVKPIIGADFKMQSDEFGEELTQVTLLAADNVGYKNLTLLISKAYLRGHVQHHPVIDKAW
LAEMSEGLIVLSGGKSGEIGRGLLKGNRQIVQGCVDFYKQHFPDRFYLELLRTGRPDEET
YLHFAVELAEQQDLPVVATNEVVFLSPDLFDAHEIRVAIHDGYTLEDPRRPKNYSPQQYL
RTEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMKETEFLVMKSREGL
EERLEFLFPDEEERKRRRPEYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLIPPDPGMTLDKAFKAEPA
LPELYEADEEVKELIDMCHILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEREGKEPVQIESIPLEDPASFRLL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKETLDPTYGIILYQEQVMQIAQILAGYTLGGADMLRRAMGKKKPEEM
AKQRAIFEEGAIKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECFRMKLTVLPPDINSGLYRFNVDENGAIVYGIGAIKG
VGEGPIDAILEARNKGGHFKDLFDFCARVDLKRVNKRVIEKLIYAGALDRLGPHRAAMMA
SLNDAVKAASQHHQAEAFGQTDMFGVLTDAPEEVEHKYTQVPPWPEKVWLEGERDTLGLY
LTGHPINAYVKELNKYTSCRLKDATPTRRDQSVTVAGLVIAARVMTTKRGTRIGIMTLDD
RSGRMEVMLFSDALDRYAELLEKDRILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSVSIDANQINDQFFEQFSRILEPHKAGTVPVNVYYQRADARARLTLGTEWRVTPSDT
LLDDLKQLLGKSQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcccaaattcatccacctgcgtgttcatagtgacttctcgatggtggatggc
ctcaacaaagttccgccaatcgtaaagaaagttgctgagctcggtatgcccgcaatggcg
ttgaccgactttaccaacctatgtggtttggtgaagttttacggtacggcgcatggcagt
ggtgttaaaccgatcatcggtgctgactttaaaatgcagtcggacgagtttggtgaagag
ctgacacaagtgactttgcttgcggcggataatgtaggttataagaacctgacgttattg
atatcaaaagcgtacttacgtggacatgttcaacaccacccagtgattgataaagcctgg
ttggctgaaatgtctgaaggcctgattgtattatccggcggtaaaagcggggaaattggt
cgcggccttttgaaaggcaaccgtcaaatagtgcaagggtgtgttgatttctataaacag
cattttccagatcgcttttatcttgagctacttcgtaccggtcgtccagatgaagaaact
tatcttcactttgcggttgaattggcagagcagcaagacttgccagtagtggcgaccaat
gaagttgtattcctgagtccagacctatttgatgctcatgaaatacgcgtagcgattcac
gatggttacacattagaagatccgcgtaggccaaaaaactacagtccgcagcaatatctt
cgtacagaagaagaaatgtgtgagctgtttgctgatattcctgaagcgttagaaaacagt
gtcgagatagcgaagcgttgtaacgtgactgtgcgcttaggtgagtacttcctaccagct
ttcccaaccgaagggatgaaagagactgagttcctagtcatgaaatcccgagaggggttg
gaagagcgtttagagttcctatttccagatgaggaagagagaaaacgtcgccgccctgaa
tatgatgaacgtcttcagatagagctagatgttatcaaccaaatgggatttcctggttac
ttcttgatcgtaatggagttcatccagtggtcaaaagataatggaattcctgtcggtcct
ggacgtggttccggtgctggttctttggtggcttacgcactaaaaatcaccgatctggat
ccactagaatacgacttgctgttcgaacgtttcttgaacccagaacgtgtttcgatgccc
gatttcgacgtcgatttctgtatggataaacgtgaccaggttattgaccacgttgcggaa
atgtacggtcgtgacgcggtgtctcagatcatcacgtttggtaccatggcggcaaaagcg
gtaatccgtgacgttggccgcgtattgggccacccatttggttttgttgatcgtatttca
aagctgatcccgcccgatccaggtatgacgctagataaagcgtttaaagctgaacctgca
ctacctgaattgtatgaggccgatgaggaagttaaagaactcatcgacatgtgtcatatt
ttggaaggctgtacgcgaaacgccggtaaacacgctggtggtgttgtaatttcacctaca
acaattaccgattttgcgccaatttatgcagacgctgaaggtcactttccggttactcaa
tttgataaaaacgatgttgagaccgctggcctagttaagtttgacttcttaggtttacgt
accttaaccattattgactgggcgttagggctgattaacccacgcctagagcgagaaggt
aaagaaccggttcaaattgaatccataccgttagaagaccctgcctctttccgtttgttg
caaaactctgaaacgacagcagtattccagcttgaatctcgaggcatgaaagagctgatc
aaacgacttcagccagactgtttcgaagacatcatcgcattggtagcactcttccgtccg
ggtcctttgcaatcgggcatggtagataactttatcgaccgtaaacatggtcgagaagcg
atctcttatccagatgaaaagtggcaacacgagtcgctaaaagagacgcttgatccaacc
tacggcatcatcctgtatcaagagcaggtaatgcagattgcgcagatcttagcaggttac
acgctaggtggtgcggacatgcttcgtcgtgcaatgggtaagaaaaagccagaagagatg
gcaaaacaacgtgctatctttgaagaaggtgcgataaagaacggtatcgatggcgagttg
gcgatgaaaatcttcgacttggtagagaagttcgccggttatggttttaacaaatcgcac
tctgctgcttatgcattggtttcttatcaaactctttggctgaaaacacattatcctgcc
gaatttatggctgcggtaatgacagccgatatggataacacggaaaaagtcgttggcttg
gtcgatgagtgtttccgtatgaagctcaccgtgctgccaccagacatcaactctggccta
tatcgctttaatgttgatgaaaatggcgcaattgtttacggtattggtgcgataaaaggg
gttggtgagggccctatcgatgcgattcttgaggcgagaaataaaggtggtcactttaaa
gacctatttgatttctgtgctcgagttgatctaaaacgtgtcaataaacgagtgatagag
aagctgatttacgcgggcgcgttggatcgactaggcccacaccgcgcggcgatgatggcg
tcactcaatgatgcggtaaaagcagcaagtcaacatcaccaagctgaggcgtttggtcaa
acggatatgtttggtgtgctgacggatgcacctgaagaagtagagcataagtatacgcag
gttccgccttggccagaaaaagtgtggttagagggcgagcgtgataccctaggtctatat
ttgacagggcacccaattaacgcctacgtaaaggaactaaacaaatacaccagttgtcga
ctaaaagacgcaacgcccactcgccgcgatcaatctgtcacggtagccggcctggttatt
gccgctcgtgtaatgacgaccaagcgtggtacacgaattggtattatgacactggatgac
cgaagtggccgcatggaagtgatgttgttctctgatgcgctggatcgatacgctgaactt
ctcgaaaaagacagaattttggtcgtttctggacaggtcagctttgatgacttcaacggt
ggccttaaaatgtcggcgcgtgaagttatggatctcggcagtgcgcgcgagaaatacgct
cgtggtttgtcggtatcgatagatgcaaatcagatcaacgatcagttttttgagcagttc
agccgtattttagaaccgcacaaagccggaaccgtacccgtcaatgtatactaccagcgt
gccgacgccagagcgcggttaacattgggcaccgagtggcgagttacgccaagtgataca
ttactcgacgatttaaaacagttgcttggcaaaagccaggtagaactcgaatttaactaa
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