Vibrio alginolyticus: N646_1490
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Entry
N646_1490 CDS
T02840
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vag
Vibrio alginolyticus
Pathway
vag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N646_1490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_1490
Enzymes [BR:
vag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N646_1490
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N646_1490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
Helicase_RecD
AAA_11
SLFN-g3_helicase
Viral_helicase1
UvrD-helicase
AAA_22
AAA_16
nSTAND3
UvrD_C
DEAD
CbiA
AAA_28
MukB
TrwB_AAD_bind
ResIII
Herpes_Helicase
T2SSE
YrbL-PhoP_reg
NTPase_1
AAA_7
SRP54
RNA_helicase
DUF87
AAA
Motif
Other DBs
NCBI-ProteinID:
AGV17323
UniProt:
A0A2I3C906
LinkDB
All DBs
Position
1:complement(1573412..1575559)
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AA seq
715 aa
AA seq
DB search
MTTNHNLHSGQDSLLVVLERLAHKGAIRQLDYQFACFIDSQTHDEQSDSQALAFIAGVVS
SELGKGHICLSLFDAQGQSTDLASKLGLFGESALALNTQLQGIDWIQVLKNSTVVGAQGE
ALPLMFDGERLYLHRYWHYEVTLAEKLNQLGAAVNLQPQEFARLSELLNHLFARQYHFLF
NALGKAVEAGSSNQVLRQQLLCDHLDVVASESLDWHAIDSVLSNARKVQDLQQLDELVPL
SACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQATHEKNLTIKLVAPTG
KAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLHLDIL
VIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYGKEQA
SAIAKLTGFDTLAHTGNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNSGSAASVDNVW
ARDFSDIEHFALSSQHYNQMMQTLVQEYGRYLKRIGQQETDPKTGEPESLTHKAKAVLET
FNQCRLLCAIREGDFGVAGLNQRIEKALAARKFIQVQDEIWYHGRPVMVTRNDHGLGLYN
GDIGICMRDDTEEEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFDYTLM
ILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIKVKTTRASGLVQRLTN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaatcacaatcttcattctggccaagatagtttattggtagtgctggaacgc
ttggcgcacaaaggtgctattcgtcagctcgactaccaattcgcctgttttattgattct
caaacgcatgatgaacagtcggacagtcaagcattggcgtttatcgcgggtgttgtcagt
agtgagcttggcaaaggacatatctgtctgtctctgttcgatgcacaagggcaatctacg
gatttagccagtaagctagggctgtttggtgagtcggcattggcgctcaacacacagttg
caaggcatagactggattcaagtattaaaaaattccaccgtggtcggcgcgcaaggagaa
gccttgccgctgatgttcgatggcgagcgtctgtatctgcaccgctattggcattatgaa
gtgacactggcggaaaagctcaatcagttgggcgccgcagttaacttgcaaccacaagag
tttgcgcgattatcggagttgctcaaccatctgttcgcacgccaataccattttctgttt
aacgcgttgggcaaagcagtagaagcgggaagcagcaaccaagtgttgcgtcaacaattg
ttgtgtgatcaccttgatgtggtcgcaagcgaatcgttggattggcacgccattgattcc
gtgcttagcaatgcgcgcaaggttcaggatttgcagcaactggatgagctggtgccactt
tcagcttgtgtgaactggcaaaaagtcgcggcggcggttgcgttaactcgtcgatttgct
gtgatttctggtggccctggtacgggtaaaacgacgacagtaaccaaattgcttgctgct
ttgattgaacaggcgacgcacgagaaaaatctaaccatcaagctggtggccccgacgggg
aaagcggcggcgcgattaaccgagtccattggtaaagcagtgcaagaactgccagtttct
ccggagctaaaagccaaaattccgactgaatcgagcaccttgcatcgattgctgggcgcg
attcctaatagcgcagaatttcgtcacaacaaacaaaatccactgcatttggatattttg
gttatcgacgaagcgtcgatggtcgatttgccaatgatgtacaaagtggtcgatgcctta
ccgaaacatgcgcggctgattttgctaggtgataaagaccaacttgcctcagttgaagca
ggggcagtgttgggtgatatctgttcgttccatgcattgggttatggcaaagagcaggcg
tcagccatcgcaaaactgacgggtttcgatactttagcccatacaggtaacagtgcatct
agcattgctgatagtttatgtatgctgcaaaagagctaccgatttgacgctcgctcaggc
attggtcagttggcaaaagcggttaactcaggttctgctgcgagcgtagataacgtctgg
gcgcgtgacttttccgatatcgaacatttcgccctaagtagtcaacattacaaccaaatg
atgcagacgttggtgcaggaatacggtcgttacctcaaacgcattggacaacaggaaact
gatcctaaaaccggagagccagagtcgctaacgcacaaagccaaagcagtgttagagact
ttcaaccaatgccggctactgtgcgcgatccgtgaaggtgactttggtgtggctgggcta
aaccaacgcatcgagaaagcgctcgcggcgcgcaagttcattcaagttcaggatgaaatt
tggtatcacggcagacccgtcatggttacgcgtaatgatcacggtttaggtttgtataac
ggtgatatcggtatttgtatgcgagatgacactgaagaagaacctcgtttgaaagtcttt
ttcgagttacctgacggcagtgtgaaatcggtcttgccaagtcgagtacctgaacatgaa
acggcttacgccatgaccatccataaatcgcaaggcagtgaatttgattacacccttatg
attttgccaccagactttagcccgatattaacccgtgagttgatttacacaggcattacc
cgcgcgaaaaagcgcttagctctttatgccgagctcaatgttctgaagcgaggcattaag
gtgaaaacgactcgtgcgagtgggctagtacagcggcttactaactaa
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