Vibrio alginolyticus: N646_1646
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Entry
N646_1646 CDS
T02840
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
vag
Vibrio alginolyticus
Pathway
vag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
N646_1646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_1646
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
N646_1646
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
ZapD
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AGV17479
UniProt:
A0A2I3C9T5
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Position
1:1765967..1768528
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AA seq
853 aa
AA seq
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MKAEQKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAG
EPIPMAGVPFHAVEGYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEA
LLSERVDNLIAAIYHYNGKFGYATLDVTSGRFQLTEPETEEAMTAELQRTAPRELLFPED
FEPVHLMASRNGNRRRPVWEFELDTAKQQLNQQFGTKDLVGFGVEHASLGLCAAGCLIQY
VKDTQRTALPHIRSLTFDHQDQSVILDAATRRNLEITQNLAGGTDNTLAAVLDHCATPMG
SRMLKRWLHQPMRCIETLNNRLDAIGEIKEQALFADLQPTLKQIGDIERILARLALRSAR
PRDMARLRNAMQQLPELESVTTSLTHPYLTKLAKYAAPIDEVCDLLERAIKENPPVVIRD
GGVIAEGYNAELDEWRKLADGATEYLEQLERDERERHGIDTLKVGYNNVHGFFIQVSRGQ
SHLVPPHYVRRQTLKNAERYIIPELKEHEDKVLNSKSKALALEKQLWEELFDLLMPNLEK
LQNLASALSQLDVLQNLAERADSLDYCRPTLVKDAGIHIQAGRHPVVEQVTTEPFIANPI
ELNPARKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAQIGSLDRIFTRIGASD
DLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGA
MTLFATHYFELTELPSQLPNLANVHLDAVEHGDSIAFMHAVQEGAASKSYGLAVAGLAGV
PKTVIKNARNKLSQLEQLGQHSDTPRPSAVDVANQLSLIPEPSEVEQALSGIDPDDLTPR
QALEELYRLKRML
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctgaacaaaaacacactccgatgatgcagcaatacctcaagctaaaagctgag
aacccagagattttgctgttctaccgcatgggcgatttctacgaactcttttacgatgat
gccaagcgagcttctcagcttcttgatatttcattgaccaaacgtggtgcgtctgcaggt
gaacctatcccaatggcgggtgtgccatttcacgccgtagagggctacctggcaaaactt
gttcagcttggtgagtctgtggcgatctgtgaacagattggcgatccggccaccagcaag
ggcccggtagaacgtaaagttgtgcgtatcgtgacaccaggtactgtgacggatgaagcg
ctgctttctgagcgtgtcgataacttaatcgcagcaatttaccattacaacggtaagttc
ggttatgcgacgctggatgtcacctctggtcgcttccaactgacagaaccagaaactgaa
gaagcgatgacagccgagcttcaacgtaccgcaccacgtgagctactgttcccagaagat
tttgaacctgtacatttaatggcgagccgcaatggtaaccgtcgtcgcccagtctgggag
tttgagcttgatacggctaagcaacaactcaatcaacaatttggcacaaaagatctggtt
ggttttggtgtagaacatgcgtccttagggttatgtgctgctggttgtttgatccagtac
gtaaaagatactcaacgtacggctttacctcatattcgctctttaacgtttgatcatcag
gatcaatccgtcatccttgatgctgctacccgacgtaatctggaaattactcaaaatcta
gcaggcggaaccgataacacgctcgctgcagtactcgaccattgtgcaactccgatgggc
agccgaatgctgaagcgttggttgcatcagcctatgcgttgcattgaaacgttaaacaat
cgtcttgatgcgattggtgagattaaagaacaagctctgtttgccgatcttcaaccaacg
ttaaagcaaattggtgatattgaacgtatcttagcgcgccttgcattacgctctgctcgc
cctcgcgatatggctagacttcgcaatgccatgcagcagctaccagagctagaatctgtc
accacttctttaacccatccgtacctaacaaaattggcgaagtatgcagctccgattgac
gaagtatgtgacctgttagagcgcgcgattaaagaaaatccgccggttgttattcgtgat
ggtggcgtcatcgctgaaggctacaatgcggagctcgatgaatggcgaaaattggcagat
ggtgcaacagaatatcttgagcagcttgagcgagatgagcgtgaacgacacggtatcgat
acgcttaaagtaggctacaacaacgttcatggcttctttatccaagtgagccgtggccag
agccatttggttccaccgcattatgtacgtcgccaaacactcaaaaacgctgaacgctac
atcatcccagagcttaaggaacacgaagacaaagtacttaactcgaaatctaaagcgtta
gcacttgagaaacagttgtgggaagaactgtttgatctattgatgccaaaccttgagaag
ctgcaaaacctagcttctgctctgtctcaactggatgtattacaaaacctagcagagcgt
gcagattcgttagattactgccgcccaacgcttgtgaaagacgcaggaattcacattcaa
gctggtcgtcatccagtcgtagaacaagtaacaacagagccgttcatcgcgaacccaatt
gagctgaacccagcccgtaagatgttgatcattaccggtccaaacatgggtggtaaatca
acctacatgcgtcaaactgcgctgattgcattgatggcacatatcggctcttatgtaccg
gcagaatccgcacagattggttctttagatcgtatatttactcgtattggtgcgtcagat
gatcttgcatctggccgctcgaccttcatggtagaaatgaccgaaacagccaatattctt
cacaacgcaactaagaatagtttggtgctaatggatgaaatcggacgtggtactagtact
tacgacggtctgtctttagcttgggcaagtgcggaatggctcgcaacacaaattggtgcg
atgaccctatttgcaacccactacttcgaattaacagagttaccaagccagctgccaaac
ttagcgaacgttcacttggatgccgtagaacatggagacagcattgcctttatgcacgca
gttcaagaaggtgcggcaagtaagtcttacggtctggctgttgcgggcttagcaggcgta
ccaaaaacggtcatcaaaaatgcgcgtaacaagctatctcagctagagcaactggggcaa
cacagtgacacaccgcgtccaagtgcagtagatgtggctaaccagttgagcctgattcca
gagcctagcgaggtcgaacaagctctgtcaggtattgatcctgacgacttaacgccacgc
caagctcttgaagagctgtatcgcttgaaaaggatgctgtaa
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