Vibrio alginolyticus: N646_1773
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Entry
N646_1773 CDS
T02840
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vag
Vibrio alginolyticus
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vag03021
]
N646_1773
Transcription machinery [BR:
vag03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
N646_1773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
RelB-like
WWE
Motif
Other DBs
NCBI-ProteinID:
AGV17604
UniProt:
A0A2I3CB90
LinkDB
All DBs
Position
1:complement(1900064..1902973)
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AA seq
969 aa
AA seq
DB search
MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPVTRVTFNVGDV
IDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREIFLSNQIRFNKPQDKLYAGQI
DRMDNFVLRYRALTNQFEQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
DAENPFDTQQYVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEDQYAPVADAITSLF
SGEKLPNEAKNQITELLSEQDVEPLFRIIESEADEEAKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPTRNVHLMPMDIPPQYTTSMRVAGMIGGKMSSEARAMKNLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQNRDIDIHVPYLKGTSQAILARWFDEGLSAFAETCPTGRAVYDKYSDDLIEILASGD
TSTLDEIIEASAKMNKELKSQLEQGRDRLLEMHSNGGEKAQQIVEKIESTDGDTNLVTFA
LSLFDTIGLNQDDKGENALIVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTILLELIYAVDAQAPKRSGIARFLPKT
PIRLMMDSRGNDLSAQVEFESFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDVLIEEKV
EEVRKQAHQDMQHSLNAELERLQALKAVNPNIRDEEIEAIDAQIKELTGYINQAQVQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgctttggggcagcgctggattagcgatacggaaagcgatttaggtttaggt
accgttgtagcaatggatgctcgtactgtgacattgatgtttgcagcgtcagaggaaaac
cgagtttacgcacgtaacgatgcacctgttacccgagtcacctttaatgttggggatgtc
atcgattgccaagaaggttggtctctaaaagtagaagaagtactggaagatgaaggtctt
tacacctatttcggtactcgtgaagacacgcaagaaaccgctgttgttctgcgtgagatt
ttccttagcaaccaaattcgttttaacaaacctcaagataagttgtacgccggtcaaatc
gaccgtatggacaactttgttctgcgttaccgtgcgctaaccaaccagtttgagcagcat
aagagcccaatgcgtggcctatgtggtatgcgtgcaggtttgatccctcatcagctttac
atcgcgcacgaagttggccgtcgtcacgcgccacgcgtcttgttggcggatgaggtaggt
ttgggtaaaaccatcgaagcgggcatgatcatccaccaacaagttctgtctggtcgtgcc
gaacgcattttgattgtggtgcctgaaacactgcagcatcaatggctggttgagatgatg
cgtcgtttcaatctgcatttctctatctttgacgaagagcgctgtatcgaagcgtttgcg
gatgcagaaaacccatttgatactcagcaatatgtgctgtgttctttggatttcctacgc
aagagccgcaagcgttttgaacaagcactggaaggtgaatgggacctactggttgtcgat
gaagcgcatcaccttgaatggagccaagataaaccgagccgtgaataccaagtggtagaa
ggcttggctgaacgtactccaggtgtgttgctactgactgcaacgccagagcagcttggt
cgtgagagtcactttgctcgtctgcgtttattggacccagaccgcttctatgattacgaa
gcattcgttgaggaagaagatcaatacgcgcccgtagcggatgcgattacttcactcttt
tccggtgaaaagctacctaatgaagcaaaaaaccagatcactgagttgttgtctgaacaa
gacgtagaaccacttttccgtattatcgaaagtgaagcggacgaagaagctaaagcgtcg
gcacgccaagagctgatcgataacttgatggatcgtcatggtacagggcgtgttctgttc
cgtaacacgcgcgcggccatcaaaggcttccctacgcgtaacgtgcatctgatgccaatg
gatattccaccgcaatacactacatcaatgcgtgttgctgggatgattggcggtaagatg
agttctgaagcacgtgcgatgaagaacctttacccggaagaaattttccaagaatttgaa
ggcgatgacgcgagctggtggcagtttgactcgcgtgtgaattggttgcttgaaaaagta
aaagagaagcgcagcgagaaaatcctcgtgattgcttctcgtgcgagtaccgcactgcaa
ttggagcaagcactgcgtgagcgtgaaggtatccgcgccaccgttttccacgaaggtatg
tcgattcttgaacgtgacaaagcggcggcttactttgcgcaagaagaaggtggagcacaa
gttcttatctgtagcgaaatcggctctgaaggtcgtaacttccagtttgccaaccaactt
gtcatgttcgacttgccatttaacccagacttgcttgagcaacgtattggtcgtttggac
cgtatcggtcaaaatcgcgatatcgacattcatgttccttacctgaaaggcacatcgcaa
gcgatcctagcacgttggttcgatgaaggcctgagcgcttttgcggaaacctgcccaaca
ggccgtgctgtttacgataagtactccgatgatctgattgaaattcttgcctctggtgat
accagcacgctagatgagatcattgaagcgtcagcaaaaatgaataaagagctgaaatcc
caattggagcaaggccgtgatcgcctattagaaatgcattcaaatggcggggaaaaagca
caacaaatcgttgagaaaattgaatcaactgacggcgataccaatctggtcaccttcgca
ctttctctttttgacacgattggcttgaatcaagacgataaaggtgaaaacgccctgatt
gtgaccccatctgagcacatgatggtgccaagctacccaggtctgccatacgaaggagcg
acgatcacgtttgatcgtgatacggctttatctcgtgaagatatgcactttatcagttgg
gaacacccaatgatccagggtggtatcgatcttcttatgagtgaaggggtggggacgtct
gcggtatctctattgaaaaacaaagcgttaccagtcgggactattcttcttgagttgatt
tacgcggtagatgcgcaagcgccaaaacgcagtggtatcgcgcgcttcttaccgaaaacg
ccaatccgtttaatgatggactcgcgtggtaatgatttgtctgctcaagtggagtttgaa
agctttaaccgccagctcagccctgtaaaccgtcacttaggtagcaagttggttacgtcg
gtacagaaagacgtacaccgcttaattgaagccggtgatgttcttattgaagagaaggtc
gaagaagtacgcaaacaagctcatcaagatatgcagcacagtttgaatgcagagcttgag
cgtttgcaagcactgaaagcggtgaacccaaatattcgtgacgaagaaattgaagctatc
gacgcacaaattaaagagctcactggttacatcaaccaagctcaggttcagctcgactcg
ctgcgtttgattgtggtgagccacaactaa
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