Vibrio alginolyticus: N646_2080
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Entry
N646_2080 CDS
T02840
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vag
Vibrio alginolyticus
Pathway
vag00300
Lysine biosynthesis
vag00470
D-Amino acid metabolism
vag01100
Metabolic pathways
vag01110
Biosynthesis of secondary metabolites
vag01120
Microbial metabolism in diverse environments
vag01230
Biosynthesis of amino acids
Module
vag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N646_2080
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N646_2080
Enzymes [BR:
vag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
N646_2080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGV17899
UniProt:
A0A2I3CCF0
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All DBs
Position
1:complement(2251899..2253152)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
DVYKFAQSLPNLNVQGIDCHIGSQLTNIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRKGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggatgatggccagctttgggccgaagacgtcccacttcaa
gctcttgcagagcaatatggcactcctctttatgtatattctcgagccacgctagagcgc
cattggaaggcgtttgatagtgctgtgggtcagcatcctcacctggtttgctacgcggtg
aaagccaactcaaacttaggcgtattgaacacgctagcgcgtttgggatcgggttttgac
atcgtgtcgggtggtgaacttgagcgtgtgattgccgcaggcggtgatccgaaaaaagtc
gttttctctggtgttggtaaaacaccggcagagatgaagcgcgctcttgagctaggtatc
aaatgtttcaacgttgaatctgagccagagctagaacgtttgaacaaggttgcgggtgag
cttggtgtgattgcgccaatttctctgcgtatcaatccagatgtcgacgcgaaaacacac
ccttacatttcgactggtcttcgcgacaataaattcggcattgcgtttgatcgtgcgcca
gatgtttataaattcgcgcaaagcctgccgaacttgaatgtgcaaggtatcgactgccac
attggttctcagctgaccaatatagacccatttatcgacgcgacagaccgtttattagcc
ctgattgatgatttaaaagcgcaaggcattaacattcgtcaccttgacgtcggcggtggt
ttgggtgtggtctatcgtgatgaattaccacctcagccttctgattacgccaaagcgtta
ctaggccgtcttgaaaatcaccaagacttggagctgatctttgagccaggccgtgcaatt
gctgcgaacgcaggtatattgctaacgcgtgttgagtttttaaaacatactgagcataaa
aactttgcgattatcgacgctgcaatgaacgacttgatgcgtcctgcgctataccaagca
tggcaagatattgtgccagtttcaccgcgaaagggtgaagctcagacttacgacttggtt
ggtcctatttgtgaaaccggcgacttcttgggtaaagatcgcgcactcgttttgcaagaa
ggtgatctactcgcggttcgttcagcaggtgcctatggttttgtgatgtcttcgaactac
aatactcgtacccgagcagcagaagtgatggtggacggtaaacaaagccacttagttcgc
cagcgtgaggagctgaccagtttgtggcagctggaacagattctaccggagtaa
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