Vibrio alginolyticus: N646_2108
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Entry
N646_2108 CDS
T02840
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vag
Vibrio alginolyticus
Pathway
vag03420
Nucleotide excision repair
vag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N646_2108
03430 Mismatch repair
N646_2108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_2108
Enzymes [BR:
vag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N646_2108
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N646_2108
MMR (mismatch excision repair)
Other MMR factors
N646_2108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGV17925
UniProt:
A0A2I3CCT6
LinkDB
All DBs
Position
1:complement(2286656..2288830)
Genome browser
AA seq
724 aa
AA seq
DB search
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSAGGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDEKQWPARQVAWWINGKKDEGLRPSHIDAYHDPVTKTYLQLYTAYQE
ACDRAGLVDFAEILLRAHELLRDNKFVREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
ECHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNTLIAN
NTERMGKELWTDGVVGEPISVYSAYNELDEARFAVNKIKEWQDKGGALNDAAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYMRLIANRNDDAAFERVVNTPTRGLG
DKTLETIRFAARDRGCTMWEASVAMLDEKVLAGRAAGALSRFIELVTALEDDTLEMPLHH
QTDHVIKYSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEDMSLLTAFLTHAA
LEAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPSSSGRF
SQTVVKESFNETGFTLGSRVMHPKFGEGTIINFEGSGPQSRVQIAFNGEGIKWLVTAYAR
LEKL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccatctctattactcgacggtttgaacgataaacaacgtgaagccgttgca
gcacctctagaaaacttgctcgttcttgctggcgcaggaagtggtaagacacgcgttctt
gttcaccgtatcgcttggctgatgtcggtcgagcaagcttctccgttttcaattatgtcg
gtaacctttaccaataaggcggcggcagagatgcgtggacgtatcgaagagctaatgatg
ggcagtgcaggcggtatgtggaatggtactttccacggcatttgtcaccgtattctgcgt
gcacactatcttgatgcgaagctaccggaagatttccaaatcattgacagtgacgaccaa
cagcgtctactaaagcgtttgattaaagcgcaaaacctcgatgagaagcagtggccggca
cgccaagtggcatggtggattaacggtaagaaagacgaaggtctgcgcccgtcgcacatt
gatgcgtaccatgatccagtaaccaagacatatctacagttgtacaccgcttaccaagaa
gcgtgtgatcgtgctggtttagtcgattttgcggaaatcttgctgcgcgcacatgagcta
ctgcgtgataacaagttcgtccgtgaacactaccaagcacgctttaagcatatcttggtg
gatgagttccaagataccaacaacattcaatatgcttggctacgtatgatggcgggtcct
gagtgtcacgtgatgatcgtaggtgatgacgaccagtcgatttatggttggcgtggtgca
aaagtcgagaacattgagaagtttacgctcgaattcccaagcgtgaataccattcgtctt
gagcaaaactaccgttccactaagaccattctggaagcatctaacaccctgattgcgaat
aacaccgagcgtatgggtaaagagttgtggacggatggcgtggtcggtgagcctatctcg
gtttacagcgcttacaacgaattagatgaagcccgttttgcggtgaacaaaatcaaagag
tggcaagacaagggcggtgctctgaatgacgctgcgatgctttaccgtaacaacgcccag
tcgcgtgttctggaagaagcgttaattcaagccggtctgccttatcgtatctatggcggc
atgcgattcttcgaacgtcaggaaatcaaagatgccttgagctacatgcgtctgattgcc
aaccgtaacgatgatgcagcgtttgaacgtgtggtgaatacgccaacgcgtggtttgggc
gataagacgcttgaaaccatccgttttgcggctcgtgaccgtggttgcaccatgtgggaa
gcgagtgtagctatgttggacgagaaggtgcttgctggtcgcgctgctggtgctctgagc
cgttttatcgagcttgtcaccgcgctagaagacgacaccttagagatgccgctgcatcac
caaactgaccatgtaattaaatactcgggcttgttcgcgatgtacgagcaagagaagggc
gaaaagtctaaggcacgtattgagaacttggaggaattggtgaccgcaactcgccaattc
gagaaaccagaagaagccgaagacatgtcactgctgacggcattcctaacccacgcagca
ctagaagcgggcgaaggacaagcggacgaatttgaagatgcggttcagctcatgacatta
cacagtgcgaaaggtctagagttcccattggtgtttatggtcggtgtggaagaaggcatg
ttcccaagccaaatgtcggcagaagaagcagggcgcttagaagaagaacgccgtctgtgt
tacgtaggcatgacccgtgcaatgcagaaactgtacatcacttatgctgaaatgcgtcgt
ttgtacggtcaggataaataccataaaccgtctcgctttatccgtgaactgccagaaact
tgtttagatgaagtacgaatgaaggcgcaagttagccgtccttcaagcagtggtcgattt
agccaaactgttgtgaaagagagctttaatgaaaccggctttacgctaggttctcgtgtg
atgcatccaaagtttggtgaaggcaccatcatcaacttcgaaggcagtggtccacaaagc
cgtgtacagattgcctttaacggtgaaggcatcaaatggttggtaactgcttacgcacga
ctagagaaactgtaa
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