Vibrio alginolyticus: N646_2664
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Entry
N646_2664 CDS
T02840
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vag
Vibrio alginolyticus
Pathway
vag03410
Base excision repair
vag03430
Mismatch repair
vag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N646_2664
03430 Mismatch repair
N646_2664
03440 Homologous recombination
N646_2664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_2664
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N646_2664
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N646_2664
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N646_2664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AGV18476
UniProt:
A0A2I3CEY4
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All DBs
Position
1:2879045..2880652
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AA seq
535 aa
AA seq
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MHSYQKLGGIEQAVDLLFQAIKEQKRIIVVGDFDADGATSSALSVLALRMLGSHNVDYLV
PNRFEDGYGLSPEVVDQALELGAEMIMTVDNGVSSIEGVRYAKENGITVLVTDHHLPGQV
LPDVDAMVNPNLESCSFPSKALAGVGVAFYLMMALCVHMRKHNWFAEQGMQEPKLMELID
LVALGTVADVVPLDENNRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVASDFGFAL
GPRINAAGRLDDMSFGVELLMCNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERL
QFGEGNELPYGLALFQRDWHQGVIGILASRIKEKFHRPVIAFADGGEGTIKGSCRSIPGL
HMRDALDFIDTQNPGLIIKFGGHAMAAGLTIKEQDFERFSRLFDEVVKKELDEAALKGVI
MSDGELKPEEFSMHVAEQLRSGGPFGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLYK
GHPTNVMIDGIAFNVDLRRWPDASVKTVRLAYKLDVNEFRGNQSLQLMIDHIEAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ttgcattcatatcaaaaactcggggggattgagcaagctgtcgatcttttgtttcaggcg
ataaaagaacaaaaacgcatcatcgttgtcggtgattttgacgctgatggcgcgacaagc
tcagcattatcagtgctcgcgctgcgtatgcttggtagtcacaatgtggattacctagtg
ccaaatcgttttgaagacggttatgggttaagcccagaagtcgttgaccaagccctagag
cttggcgctgagatgatcatgacggtggataacggcgtctcatcaatcgaaggcgtgcgt
tacgcaaaagaaaatggcattactgtgcttgttaccgatcaccacttgccaggacaagtg
ttgcctgatgtggatgcaatggtgaacccaaaccttgagagctgtagctttccatctaaa
gcgcttgcgggtgtaggggtcgcgttttatctcatgatggcactatgcgttcatatgcga
aaacacaattggtttgcagaacaggggatgcaagagcccaaattgatggaactgattgac
cttgttgcactgggtaccgtcgccgacgtcgttccattggatgaaaacaaccgcattctt
gtacaccaaggcttgcaacgtattcgtgcgggcaaagcgcgtcccggcatccaagcatta
attgaggtcgcgaagcgcgatgcgcgtcgtttagttgcgtctgactttggctttgcttta
ggtccacgtattaacgcagcaggtcgtcttgatgacatgtctttcggtgttgaactgctg
atgtgtaacaacatccacgctgctcgtcgcatggcaagtgaattggatggcttgaaccaa
actcgtaaagagattgaagaaggcatgaagcaagaagcgatggctttctgtgagcgcctt
cagtttggtgaaggcaatgagcttccttatggcttagccttattccaacgtgattggcac
caaggtgtgattggtattttggcttcgcgcattaaagagaagtttcatcgtccagtcatt
gcatttgctgatggtggagaagggacgattaaaggctcgtgtcgttctattccggggcta
cacatgcgcgatgcgttggatttcatcgacacgcaaaacccgggtttgatcatcaagttt
ggtggacacgccatggcagcaggcttaacgattaaagagcaggattttgagcgtttcagt
cgtttgtttgatgaagtggtaaaaaaggaactcgatgaagcggcgctaaaaggcgtgatc
atgtcagatggcgaacttaagccggaagagttctctatgcatgttgctgaacagctgcga
tcgggtggcccttttggacaagctttcccagagccaatctttgatggtgagtttaaagta
ctgcatcaaaagctggtgggtgagaagcatcttaaattgatgttagagccgctttataaa
ggtcaccctaccaatgtgatgatcgacggtatcgcattcaatgttgatctacgtcgatgg
ccagatgcatcggttaaaacagtacgtctcgcgtataagctggatgtgaatgaatttcgt
ggtaatcaatcattgcaattgatgatcgaccatatcgaagctaagtaa
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