KEGG   Vibrio alginolyticus: N646_3976
Entry
N646_3976         CDS       T02840                                 
Name
(GenBank) transcriptional regulator containing GAF, AAA-type ATPase
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
vag  Vibrio alginolyticus
Brite
KEGG Orthology (KO) [BR:vag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vag03000]
    N646_3976
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vag02044]
    N646_3976
Transcription factors [BR:vag03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    N646_3976
Secretion system [BR:vag02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   N646_3976
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 HTH_50 GAF AAA_5 AAA_2 GAF_3 TACC_C Sipho_Gp157 AAA_3
Other DBs
NCBI-ProteinID: AGV19785
UniProt: A0A2I3CQD1
LinkDB
Position
2:complement(974610..976241)
AA seq 543 aa
MRSANHSELSNALLAISQSLADRSQLTQTLDAVLTAARQMTLAKHGIIYVLDQTGQALIP
STAHHNDKTIVSHPWEALQLDSASENDPFNFAIRNGEVVLINELYKYNGYDCESIYQTEQ
TLGLKSENLLAWPLIDSESKTIGLLVLLDLNVIDNEAALTEFCRMAASNIRQAVWLEQYG
QVIKNLNADNQALVRENTQLKKRTQKAYQGPIAESEEMLNVLNRLDKVLSLPVDVLLRGE
TGAGKEVIAKYIHENSNRSEQPLIVQNCAAIPEQLLESELFGHKKGSFTGADKDKVGLFE
AANGGTLFLDEIGDMPMLLQAKLLRVLQERKVRPIGTSKEIEVDVRVIAATHCNLMQQIK
DGGFRADLFYRLNVFPITLPPLRARKSDIIPLAEHFVQHTTNTLGLPQAPGLSANVRKQL
LAYQYPGNVRELKNIIERSVLLSDFETITHIEFGEQIPEDVPSIDMKAASPTPEQPAYEQ
QAQADLEDVSKSLKDVVSQYERTVIIDCLNACNWHTKKAAEQLALPMSTLNHKMKKYDIS
AAG
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgcgttcagctaaccatagcgaacttagtaacgccctacttgcgatcagtcagtctttg
gctgatcgcagccagcttacccaaacgttggatgctgtgttgaccgctgcgagacaaatg
accctcgcaaagcacggcatcatttacgttttggaccagactgggcaggcgttgattcca
agtaccgctcaccataacgataaaactatcgtttcccacccttgggaagcattacagtta
gactcagccagtgagaacgacccatttaactttgccattcgtaatggtgaagtggtgttg
attaacgagttgtataagtacaacggctatgactgcgaaagcatctatcaaactgagcag
acactgggattaaaaagcgagaacttattggcttggcctttgattgatagcgaaagcaaa
accattggactgttagtcttactcgatttaaatgttatcgacaatgaagctgcattgact
gagttttgtcgtatggccgcgagtaatattcgccaagctgtgtggttagagcaatacggg
caagtaataaaaaatctcaatgccgacaatcaagccctagtgcgcgagaacactcagctc
aaaaaacgtacccagaaagcctatcaaggtcctattgcagagagcgaagaaatgctcaat
gtcttgaatcgtcttgataaggtgctatctcttcctgtcgacgttctgttgcgtggtgaa
acgggcgctggtaaagaagtgatcgcgaaatacattcacgaaaactctaatcgttcagaa
cagcctttgatcgttcagaactgtgcggctattccagagcagttattggaatctgagctt
tttgggcataagaaaggttcatttacgggcgcagacaaagacaaagtcggtttgtttgaa
gcagccaacggcggcacgcttttcctagatgaaattggcgatatgccaatgctactgcag
gcaaagttactgcgtgtactacaagaacgcaaagttcgccctatcggtaccagcaaagag
attgaggtggacgttcgcgttatcgccgcaacccactgtaatcttatgcagcaaatcaaa
gatggcggattccgtgccgatttgttctatcgtttgaatgtgttccctattacattacca
ccattgagagctcgcaagtcagacattattccccttgccgaacatttcgtgcaacacaca
accaacacgctaggtctgccgcaagcgccagggttaagtgccaacgtacgtaaacagctg
cttgcctaccaatacccagggaacgtgcgtgagcttaagaacatcatcgagcgctcggtg
ctactgtccgattttgaaaccattactcacattgagtttggcgaacaaatcccagaagat
gtaccaagtatcgacatgaaagcagcttcacctaccccagagcaacctgcttacgagcag
caagcacaagcggatttagaagacgtttcaaagagccttaaggacgttgtcagccaatac
gagcgtacagtgatcatcgattgcttaaatgcgtgtaattggcacaccaagaaggccgct
gagcaattggcgctgccaatgagcacactcaaccacaagatgaagaaatacgacatttct
gcagctggttga

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