Vibrio alginolyticus: N646_4202
Help
Entry
N646_4202 CDS
T02840
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vag
Vibrio alginolyticus
Pathway
vag00260
Glycine, serine and threonine metabolism
vag00460
Cyanoamino acid metabolism
vag00630
Glyoxylate and dicarboxylate metabolism
vag00670
One carbon pool by folate
vag00680
Methane metabolism
vag01100
Metabolic pathways
vag01110
Biosynthesis of secondary metabolites
vag01120
Microbial metabolism in diverse environments
vag01200
Carbon metabolism
vag01230
Biosynthesis of amino acids
vag01240
Biosynthesis of cofactors
vag04981
Folate transport and metabolism
Module
vag_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N646_4202
09102 Energy metabolism
00680 Methane metabolism
N646_4202
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N646_4202
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N646_4202
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N646_4202
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N646_4202
Enzymes [BR:
vag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N646_4202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGV20011
UniProt:
A0A2I3CQM9
LinkDB
All DBs
Position
2:complement(1234044..1235339)
Genome browser
AA seq
431 aa
AA seq
DB search
MNKSYPNHSLENFFSTNLSATDDAVFAGIQAESARQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYEDVRELALEHQPKM
IIAGGSAIPRTIDFAKFREIADEVNAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAEVEKRVRKEV
KELCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgatgctgtctttgctggaattcaagcggaatccgctcgccaaaacgaacaaatc
gaacttatcgcttccgagaacattgtttctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttacccaggtcgtcgttactatggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcaaaaaaacttttcaattgtgaatac
gcaaacgttcaaccacactcaggggcacaagcaaacggcgcagtaaagctggcactgctt
caacctggtgacaccattcttggtatgtctttagacgcaggtggtcacctgacgcacggc
gcacgccctgcactttctggtaaatggtttaatgcagttcaatacggtgttgatcgcgaa
acactagaaattaactacgaagatgttcgtgagctagcacttgagcaccaacctaaaatg
atcatcgcaggtggtagcgctattccacgtactatcgactttgcaaaattccgtgaaatc
gcagacgaagtaaatgcaattcttatggtcgacatggcgcacatcgctggtcttatcgca
acaggcgcacaccctagcccattgccacacgcacacgttgttacgactacaacacacaaa
acattgcgtggccctcgcggcggtatgattcttactaaccacgaagacatcattaagaaa
atcaactcagccgtattccctggcctacaaggtggcccactgatgcacgttatcgcagcc
aaagcggtcgcatttggtgaagcgcttggccctgaatttaaaacttatattgattcggtg
atcaataacgcaaaagtcctagcggaagtattgcaaactcgcggttgcgacatcgtaact
ggtggcacagacacgcacctaatgctggttgaccttcgtccgaaagggttgaaaggcaat
aaagcagaagaagctctagagcgtgctgggatcacatgtaacaaaaatggcatcccattc
gatacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggattggtgacgtactggac
ggtttagtgaacaaccctgaaggtgacgcagaagttgaaaaacgcgttcgcaaagaagta
aaagaactttgcagtcgctttcctctataccagtaa
DBGET
integrated database retrieval system